Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., Glycolate oxidase subunit GlcD from Pseudomonas syringae pv. syringae B728a

 Score =  123 bits (308), Expect = 4e-32
 Identities = 123/494 (24%), Positives = 202/494 (40%), Gaps = 79/494 (15%)

Query: 56  SVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLT--KGVVVDL 113
           S Y+  P  V  P+   +V  + ++       RV    RG GTG +G +L   KGV++ +
Sbjct: 50  SAYRTTPMLVALPRHVEEVQTLLRLCHA---RRVPVVARGAGTGLSGGALPLEKGVLLVM 106

Query: 114 SRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDAS 173
           +R  N+ILEI+P     RVQ GV    ++ A  PHG +++PD S+    ++GG V  +A 
Sbjct: 107 AR-FNQILEIDPSARLARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNVAENAG 165

Query: 174 GQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQI 233
           G   L+YG T  ++L ++ +  +G             P T  +  +              
Sbjct: 166 GVHCLKYGLTVHNLLKVEILTVEGE------------PMTLGSDTLD------------- 200

Query: 234 VAKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLV 293
                                     FD+  +  G+EG L  ITE  + L P P+   ++
Sbjct: 201 -----------------------SPGFDLLALFTGSEGMLGVITEVTVKLLPRPQVAKVL 237

Query: 294 NVKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQ 351
              +DS + A R    ++ A  +   +E +D+  +  A++ I  H+   +       + +
Sbjct: 238 LAAFDSVEKAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFI--HAGYPV-------DAE 288

Query: 352 GINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAV 411
            I + E  G     +   V     R+ E++   +AG    +   D A   R +  RK A 
Sbjct: 289 AILLCELDG-----VEADVHADCERVSEVLT--RAGATDVRQAKDEAERVRFWAGRKNAF 341

Query: 412 GLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPA 471
                A GR  P  +  D  +P   L   +   R L     L      H   G +H    
Sbjct: 342 ----PAVGRLSPDYYCMDGTIPRRELPGVLRSIRELSGQYGLRVANVFHAGDGNMHPLIL 397

Query: 472 LDLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYR--SEYGPEFFGEELFTELRRV 529
            D   P +      +  ++++L  K GG + GEHG G    ++   +F  +EL T    +
Sbjct: 398 FDANQPGELERAEALGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDEL-TFFHAI 456

Query: 530 KAAFDPHNKMNPGK 543
           KAAFD    +NPGK
Sbjct: 457 KAAFDASGLLNPGK 470