Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., glycolate oxidase subunit GlcD from Synechococcus elongatus PCC 7942

 Score =  139 bits (351), Expect = 4e-37
 Identities = 127/491 (25%), Positives = 215/491 (43%), Gaps = 74/491 (15%)

Query: 58  YQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSL-TKGVVVDLSRH 116
           ++Q+P  VV P+ST +V    ++ ++ +   ++F  RG GTG +G +L  +  V+ ++  
Sbjct: 47  HRQIPPLVVLPRSTEEVAAAVRLCNQFD---LSFVARGAGTGLSGGALPVEDSVLIVTAR 103

Query: 117 MNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDASGQG 176
           M +ILEI+     VRVQ GVI   +  A    GFF++PD S+ +  ++GG V  ++ G  
Sbjct: 104 MRQILEIDYDNLRVRVQPGVINSWVTQATTGAGFFYAPDPSSQSVCSIGGNVAENSGGVH 163

Query: 177 SLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQIVAK 236
            L++G T++HVL L  V  D S+++                                +A 
Sbjct: 164 CLKHGVTNNHVLGLTLVLPDASVIQVG----------------------------GAIAD 195

Query: 237 FPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLVNVK 296
            P       GYDL               +  G+EG+L   TE  L L P+P++  ++   
Sbjct: 196 LP-------GYDL-------------CGIFVGSEGTLGIATEVTLRLQPLPQSVQVLLAD 235

Query: 297 YDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQGIN 354
           + S ++A      ++ A  L   +E +D+  +N A ED++        +D   ++   I 
Sbjct: 236 FSSIEAAGAAVSGIIAAGILPAGLELMDNFSIN-AVEDVV-------KSDCYPRDAAAIL 287

Query: 355 MVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAVGLL 414
           + E  G+ ++++ QQ+  + A        +Q G     + +D     R++  RK A    
Sbjct: 288 LAELDGR-ASEVAQQIRDVEA------VCRQHGARSIAIATDAEDRLRLWKGRKAAF--- 337

Query: 415 GAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPALDL 474
            AA GR  P  + +D  +P   L   + E   L            H   G LH     D 
Sbjct: 338 -AAVGRISPSYYVQDGVIPRSTLPFVLHEIEQLGQKHGYRVANVFHAGDGNLHPLILYDR 396

Query: 475 CDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYRSE-YGPEFFGEELFTELRRVKAAF 533
            DP     +  +  +++KL    GG + GEHG G     Y P  F  E    ++ ++ AF
Sbjct: 397 NDPGALERVEALGGEILKLCVNVGGSISGEHGIGADKRCYMPAMFSSEDLETMQWLRHAF 456

Query: 534 DPHNKMNPGKI 544
           DP  + NP K+
Sbjct: 457 DPLERANPTKV 467