Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 978 a.a., FAD linked oxidase (NCBI) from Rhodospirillum rubrum S1H

 Score =  681 bits (1757), Expect = 0.0
 Identities = 408/999 (40%), Positives = 551/999 (55%), Gaps = 65/999 (6%)

Query: 32   LKTAGFTGDIETQYSSRLAVATDNSVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTF 91
            L  AGF GD+   + SR+A +TDNS+YQ +P+AVV P+  AD+ +   + ++P F  ++ 
Sbjct: 23   LAEAGFRGDVLFDWGSRVAASTDNSIYQIVPEAVVCPRDRADLRVFLAVLARPAFRDLSV 82

Query: 92   SPRGGGTGTNGQSLTKGVVVDLSRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHG-- 149
            + RGG TGTNGQ L  G+VVD  R+M RIL  + + GW+ V+ GV+ DQ+N A+   G  
Sbjct: 83   TGRGGATGTNGQGLNGGIVVDFRRYMTRILAADLEAGWIEVEPGVVLDQVNAALADRGSA 142

Query: 150  FFFSPDLSTSNRATLGGMVNTDASGQGSLQYGKTSDHVLSLQAVFADGS-----LLETDL 204
             FF+PD ST++R T+GGMV+TDA GQGS  YGKT D+VL+L  +  DG+      LE   
Sbjct: 143  LFFAPDTSTASRCTIGGMVSTDACGQGSRVYGKTGDNVLTLDVMLIDGAEARLRRLEGPA 202

Query: 205  SQGLPAPNTFAAQAMQVTEQVCRTKRKQIVAKFPPLNRFLTGYDLKNALNEAEDRFDITR 264
             + L      AA A++   + C      + A  P L+R   GYDL NA   +   FD  R
Sbjct: 203  LEALATSTEPAADALRAALEACDDGAPALKAAVPHLSRRFVGYDLINA-RPSPSVFDPVR 261

Query: 265  VLCGAEGSLAFITEAKLNLTPIPKARTLVNVKYDSFDSALRNAPLMVEAKALSVETVDSK 324
            ++ G+EG+LA +  A+L LT  P  + L  + Y  FD AL +A  ++     ++E++D  
Sbjct: 262  LIVGSEGTLALVCSARLALTRRPIHKRLAVIAYRDFDGALASAQALLAHNPDAIESLDDT 321

Query: 325  VLNLAKEDIIWHSVKDLL-TDVPGKEMQGINMVEYAGQDSAQINQQVAQLTARLDEMMAN 383
            V  LA +  +   + + L T  P  ++   N VE+   D   ++ ++A L   L      
Sbjct: 322  VHTLAYQGGLLDGLPERLRTPGPTGKIPVSNYVEFTDDDPIVLSGRLAALEDAL-----R 376

Query: 384  QQAGIIGYQVCSDLASINRIYNMRKKAVGLLGAAKGRAKPVAFTEDTCVPPENLADFIVE 443
             +  ++G+ +  D A I RI+ +RK AVGLLG + GR +PVAF ED  VPP NL  F+ +
Sbjct: 377  SEPSVVGWHIAKDPAEIARIWGIRKSAVGLLGGSAGRRRPVAFVEDCVVPPANLRGFVAD 436

Query: 444  FRALLDSKNLAYGMFGHVDAGVLHVRPALDLCDPKQELLMREISDQVVKLVAKYGGLMWG 503
            FRALL+ + L +GMFGHVD G +HVRPALDL D   +  M+ ISD VV +V K+GG+ WG
Sbjct: 437  FRALLEGEGLTFGMFGHVDVGCIHVRPALDLADAGDQARMKSISDAVVAIVRKHGGIFWG 496

Query: 504  EHGKGYRSEYGPEFFGEELFTELRRVKAAFDPHNKMNPGKICTPLDTPFELVKVSDTKRG 563
            EHGKG R +Y PE  G E +    RVK AFDP N++NPGK+ TP      L KV  T   
Sbjct: 497  EHGKGVRGQYLPEMVGPEAYAAFARVKRAFDPRNRLNPGKLVTPEGDAAGLYKVDATPLR 556

Query: 564  FYDRQIDVKVRDSFKQAMECNGNGLCFNYETSSPMCPSMKVTADRRHSPKGRAGLVREWL 623
              +   D    D F  A  CNGN  C  Y TS PMCPS K T ++RHSPKGRA L+R W 
Sbjct: 557  LPNPADDA---DPFADAFRCNGNAQCQAYSTSVPMCPSFKATGEKRHSPKGRADLLRAW- 612

Query: 624  RQLTEQGIDILDLEKATLESSPTIKSMLDRVRHAFSKDKEYDFSHEVYEAMNGCLACKAC 683
              L   G  + +                             D + EVYEA++GCL CKAC
Sbjct: 613  HGLVSAGDPVAE-----------------------------DVAEEVYEALDGCLGCKAC 643

Query: 684  ASQCPIKVDVPSFRSRFLNIYHSRYPRPVKDYLVANIETLLPVMAKAPQLVNSVLAQSSV 743
             S CPI VDVP  +S FL+ YH    RP+ D L+A +ETL P+ A+ P L N VL++   
Sbjct: 644  LSSCPIHVDVPELKSLFLDRYHQTRKRPLGDRLLAELETLGPLAARLPGLGN-VLSRLG- 701

Query: 744  QKLTAKTVGYVDAPLLSVPTLAQRLRRHPVVLFDMQRLAGLSQEEREQHVLIVQDPFTSY 803
              LTA+  G VD P LS P LA RLRR  V +     +AG S     + V ++QD FTS+
Sbjct: 702  GPLTARAAGLVDLPTLSDPPLAPRLRRMRVPV-----VAGPSARPAPRGVFVIQDGFTSH 756

Query: 804  YDADVVEDFVALLLKLGKKPVLLPFKPNGKAQHIKGFLRQFRSTAANTAAFLTQVADLNI 863
            +DA  VE  V  L  LG  P ++   P GKA H+KGF  +F  TA    A L  +    +
Sbjct: 757  FDAGAVEAVVGGLQALGYAPQVVALFPTGKALHVKGFRNRFLETAKAARARLDALTP-GV 815

Query: 864  PLVGVDPALVLCYRDEYVEILGKERGEFSVLTVHEWLKPRLSQFT--PQV-TDAQPWYLL 920
            P VGVDPA VL  R EYV+     R    V  + E+L     +    PQ      P  ++
Sbjct: 816  PRVGVDPAAVLMLRQEYVQAGLAPRE--PVWLIQEFLAEEAKRGVAWPQAKAGGPPVRVM 873

Query: 921  AHCTEKTKLPNAEKEWVEIFRHFGTQLNAVAVGCCGMAGTFGHEVDKLTMSRDIYDLSWQ 980
             HCTE+T +P A  +W ++F   G        GCCGM+G FGHE    T+S  ++ LSW+
Sbjct: 874  LHCTERTAVPTAGAQWKQVFAAIGLVAEVPEAGCCGMSGAFGHEARHRTISATLWALSWR 933

Query: 981  PAL--ASLPKERCLVTGYSCRSQVKRFEQIKPKHPLQAL 1017
              +  AS P      TG+SCRSQ KR E     HP+  L
Sbjct: 934  KPVTGASGP---VAATGFSCRSQAKREEGTALPHPMALL 969