Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 960 a.a., 4Fe-4S ferredoxin (NCBI) from Rhodospirillum rubrum S1H

 Score =  115 bits (289), Expect = 1e-29
 Identities = 166/670 (24%), Positives = 254/670 (37%), Gaps = 112/670 (16%)

Query: 49  LAVATDNSVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLTKG 108
           LA  TD S Y+ LP+ VV     A+V  +  I  +     VTF  R  GT  +GQ++++ 
Sbjct: 35  LAYGTDASFYRLLPKVVVEVADEAEVARVLAICRQYRAP-VTF--RAAGTSLSGQAVSES 91

Query: 109 VVVDLSRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMV 168
           V++ L R     + I  +   +R+Q GVI  + N  +   G    PD ++ +   +GG+ 
Sbjct: 92  VLMVLGRGWTGAV-IEAKGARIRLQPGVIGAEANRKLAGFGRKIGPDPASIDTCKIGGIA 150

Query: 169 NTDASGQGSLQYGKTSDHVLSLQAVFADGSLLET--------------DLSQGLPAPNTF 214
             +ASG        +   V +++ + ADG+L++T              DL  GL A    
Sbjct: 151 ANNASGMCCGTSDNSYQTVEAMRLILADGTLVDTADARSIARFRQTHADLLAGLAA---L 207

Query: 215 AAQAMQVTEQVCRTKRKQIVAKFPPLNRFLTGYDLKNALNEAEDRFDI-TRVLCGAEGSL 273
             +         R +RK  +       +  TGY L NAL + +D  DI T +L G+EG+L
Sbjct: 208 GRRVRANAALAARIRRKYAI-------KNTTGYSL-NALVDYDDPLDILTHLLIGSEGTL 259

Query: 274 AFITEAKLNLTPIPKARTLVNVKYDSFDSALRNAPLMVEAKALSVETVDSKVLNLAKEDI 333
            FI E          A+    + +     A R   L+      +VE +D   L   +   
Sbjct: 260 GFIAEITYRTIAEHPAKASALLLFADIAEACRAVTLLKATPVSAVELMDRAALRSVE--- 316

Query: 334 IWHSVKDLLTDVPGKEMQ--------GINMVEYAGQDSAQINQQVAQLTARLDEMMANQQ 385
                     D PG   Q           +VE    DS  +   + ++   L  +     
Sbjct: 317 ----------DKPGMPAQIRGLAPGVAALLVETRAADSLALQANIEEIGQTLGAV----- 361

Query: 386 AGIIGYQVCSDLASINRIYNMRKKAVGLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFR 445
             +      SD A    ++ +RK     +GA +     V   ED   P E+LA   V   
Sbjct: 362 TPLFPPAFSSDPAVYGTLWKIRKGLFPAVGAVRATGTTV-IIEDVAFPIEHLAAATVALE 420

Query: 446 ALLDSKNLAYG-MFGHVDAGVLHVRPALDLCDPKQELLMREISDQVVKLVAK-YGGLMWG 503
            L          +FGH   G LH     D     +        D V ++V K Y G +  
Sbjct: 421 RLCHEHGYHEAILFGHALDGNLHFVFTQDFGSQAEIDRYAAFMDAVGEMVVKTYDGSLKA 480

Query: 504 EHGKGYRSEYGPEF-FGEELFTELRRVKAAFDPHNKMNPGKICTPLDTPFELVKVSDTKR 562
           EHG G       E  +G E +  +  +KA  DP   +NPG I    D    L  +     
Sbjct: 481 EHGTGRNMAPFVEMEWGSEAYGLMGEIKALLDPLGLLNPGVILNG-DPRAHLKNLKPLPA 539

Query: 563 GFYDRQIDVKVRDSFKQAMECNGNGLCFNYETSSPMCPSMKVTADRRHSPKGRAGLVREW 622
              D  ID        + +EC   G C       P+CPS+ +T     SP+ R    RE 
Sbjct: 540 A--DALID--------KCIEC---GFC------EPLCPSLFLTL----SPRQRITAWRE- 575

Query: 623 LRQLTEQGIDILDLEKATLESSPTIKSMLDRVRHAFSKDKEYDFSHEVYEAMNGCLACKA 682
           + +L   G      +KA L                      YD     Y+ ++ C AC  
Sbjct: 576 IARLESAG---ASADKAALRDL-------------------YD-----YQGVDTCAACGL 608

Query: 683 CASQCPIKVD 692
           C + CP+ ++
Sbjct: 609 CGTVCPVGIN 618