Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., FAD-linked oxidase C-terminal domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  106 bits (264), Expect = 4e-27
 Identities = 117/502 (23%), Positives = 208/502 (41%), Gaps = 77/502 (15%)

Query: 58  YQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSL--TKGVVVDLSR 115
           Y+Q P  VV P +T  V  + +   +   + V   PRG GT  +G +L    GV++ L +
Sbjct: 50  YRQPPMVVVLPSTTKQVSEVLRYCHQNGIKVV---PRGSGTSLSGGALPLADGVLLGLGK 106

Query: 116 HMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDASGQ 175
              RI EI+     V V+ GV    ++ AV   GF+++PD S+    ++GG +  ++ G 
Sbjct: 107 -FKRIREIDFDNRAVVVEPGVTNLAISQAVDHAGFYYAPDPSSQIACSIGGNIAENSGGV 165

Query: 176 GSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQIVA 235
             L+YG T+++VL  + V   G +L+               +A +               
Sbjct: 166 HCLKYGMTTNNVLGCEIVLMTGEILK------------IGGKAAECA------------- 200

Query: 236 KFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLVNV 295
                     GYDL               V+ G+EG L  ITE  + +   P+    + +
Sbjct: 201 ----------GYDLMG-------------VITGSEGLLGVITEVTVRILRKPETARALMI 237

Query: 296 KYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQGI 353
            + S ++A +    ++ A  +   +E +D   ++ A+  +  H+   L       +++ +
Sbjct: 238 GFQSVEAAGQCVADVISAGIIPGGMEMMDKPAIHAAEAFV--HAGYPL-------DVEAL 288

Query: 354 NMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAVGL 413
            ++E    D  Q+  +V +L +R++ +      G    Q+ +        ++ RK A   
Sbjct: 289 LIIEL---DGPQV--EVDELISRVEAIALG--CGSTTCQISTSEQQRLLFWSGRKAAF-- 339

Query: 414 LGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPALD 473
              A GR  P     D  +P + L   +     + +   L      H   G LH     D
Sbjct: 340 --PAVGRISPDYLCMDGTIPRKQLPLVLRRMNEMSEKYGLRVANVFHAGDGNLHPLILYD 397

Query: 474 LCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGY-RSEYGPEFFGEELFTELRRVKAA 532
              P ++         ++KL  + GG++ GEHG G  + +  PE F +    + +R+K A
Sbjct: 398 ANKPGEQDAAEAFGADILKLCVEVGGVLTGEHGVGIEKRDLMPEMFSDIDLNQQQRLKCA 457

Query: 533 FDPHNKMNPGKICTPLDTPFEL 554
           FD    +NPGK+   L    EL
Sbjct: 458 FDSEGLLNPGKVFPTLHRCAEL 479