Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 934 a.a., FAD linked oxidase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (336), Expect = 4e-35
 Identities = 159/668 (23%), Positives = 274/668 (41%), Gaps = 111/668 (16%)

Query: 48  RLAVATDNSVYQQLPQAVVHPKS---TADVVLIGKISSKPEFERVTFSPRGGGTGTNGQS 104
           R A +TD S ++ +P+ VVH ++     D + + +  + P    VTF  R  GT  +GQ+
Sbjct: 28  RFAWSTDASYFRIVPEVVVHAETLEDARDTLEVARQHNAP----VTF--RAAGTSLSGQA 81

Query: 105 LTKGVVVDLSRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATL 164
           + +G+++ L     R + ++     + + A VI    N A++P      PD +T   A +
Sbjct: 82  IGEGILLILGHDGFRKIAVSEDHNQISLGAAVIGGDANLALKPFNKKIGPDPATLASAMV 141

Query: 165 GGMVNTDASGQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAM-QVTE 223
           GG+V+ +ASG        +   + S + +FADG+ L+T   +   A      Q + ++T+
Sbjct: 142 GGIVSNNASGMCCGTAQNSYQTIASAKLLFADGTRLDTGCERSKEAFRESHQQLLSELTD 201

Query: 224 QVCRTKRKQIVA-----KFPPLNRFLTGYDLKNALNEAEDRFD-ITRVLCGAEGSLAFIT 277
               T    ++A     K+   N   TGY + NAL + ED F+ I  ++ GAEG+LAF+ 
Sbjct: 202 LAKLTASNPVLADRIRKKYSIKN--TTGYSI-NALVDFEDPFELINHLIVGAEGTLAFVE 258

Query: 278 EAKLNLTPIPKARTLVNVKYDSFDSALRNAPLMVEAKALSVETVDSKVLNLAKEDIIWHS 337
           E   N     K +      + + + A R  P +      + E +D            W S
Sbjct: 259 EVTYNTVDEAKFKASAMAVFFNMEDAARAIPPIKCDSVAAAELLD------------WAS 306

Query: 338 VK---------DLLTDVPGKEMQGINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGI 388
           +K         D L+++P  E   I ++E    D A ++     + A+L  +   +    
Sbjct: 307 IKAVTGKKGMPDWLSELP--EGAAILLIESRANDEATLDAYTQDVIAKLAHIETERPISF 364

Query: 389 IGYQVCSDLASINRIYNMRKKAVGLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALL 448
                  D    ++ + MR     ++G  + +   V   ED     E+LA+   +  AL 
Sbjct: 365 -----SRDPEVYSKYWAMRSGLFPIIGGERPKGTSV-IIEDVAFELEHLANAATDLTALF 418

Query: 449 DSKNLAYG-MFGHVDAGVLH--VRPALDLCDPKQEL--LMREISDQVVKLVAKYGGLMWG 503
                  G ++GH  AG  H  + P     +        M+++++ V+    KY G M  
Sbjct: 419 HKHGYPEGVIYGHALAGNFHFIITPTFASQEDIDRFHGFMQDVAEMVIN---KYDGSMKA 475

Query: 504 EHGKGYR-SEYGPEFFGEELFTELRRVKAAFDPHNKMNPGKICT-PLDTPFELVKVSDTK 561
           EHG G   + +    +G + +T ++R+K  FDP   +NPG I     +   + +K     
Sbjct: 476 EHGTGRAVAPFVEMEWGADAYTLMKRIKQIFDPQGLLNPGVILNDDANVHVKNIKPCPVV 535

Query: 562 RGFYDRQIDVKVRDSFKQAMECNGNGLCFNYETSSPMCPSMKVTADRRHSPKGRAGLVRE 621
             F DR             +EC   G C         CP    T+    +P+ R   +RE
Sbjct: 536 DDFVDR------------CIEC---GFC------EKTCP----TSALNFTPRQRIATLRE 570

Query: 622 WLRQLTEQGIDILDLEKATLESSPTIKSMLDRVRHAFSKDKEYDFSHEVYEAMNGCLACK 681
             R                LE+S   K   + +R A             Y+ ++ C AC+
Sbjct: 571 IAR----------------LEASGD-KQAAEEMRAAAK-----------YDVVDTCAACQ 602

Query: 682 ACASQCPI 689
            C   CP+
Sbjct: 603 LCTIACPV 610