Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 1026 a.a., FAD linked oxidase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 1213 bits (3139), Expect = 0.0
 Identities = 606/1033 (58%), Positives = 753/1033 (72%), Gaps = 32/1033 (3%)

Query: 11   MLPRLHHQSDVDPVVLTFLHELKTAGFTGDIETQYSSRLAVATDNSVYQQLPQAVVHPKS 70
            MLP+L HQ  ++PV L FL  L  + + GDI+ +YS+RLA ATDNSVYQ LPQAV++PK+
Sbjct: 1    MLPKLSHQQTLEPVYLAFLDALAQSNYCGDIDKRYSARLAQATDNSVYQFLPQAVLYPKT 60

Query: 71   TADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLTKGVVVDLSRHMNRILEINPQEGWV 130
             ADV LI  +++KPEF++V FS RGGGTGTNGQSLT G+++DLSR+ N+++EIN +E WV
Sbjct: 61   QADVKLIMTLATKPEFKQVVFSARGGGTGTNGQSLTHGLILDLSRYFNQVIEINEKERWV 120

Query: 131  RVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDASGQGSLQYGKTSDHVLSL 190
            RVQAGV+KD LNDA+RPHGFFFSPDLSTSNRAT+GGM+NTDASG GSL YGKTSDHVL L
Sbjct: 121  RVQAGVVKDALNDALRPHGFFFSPDLSTSNRATMGGMINTDASGAGSLVYGKTSDHVLEL 180

Query: 191  QAVFADGSLLET--------DLSQGLPAPNTFAAQAMQVTEQVCRTKRKQIVAKFPPLNR 242
             +V  DGS+LET        +    L +P+   +    +  ++ R  R ++ ++FP LNR
Sbjct: 181  ISVLYDGSVLETKPLDLKALEALDALESPSLGQSLQRDIA-RMTREHRGEVESRFPKLNR 239

Query: 243  FLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLVNVKYDSFDS 302
            FLTGYDLKN  NE  D F+++R+L G+EG+LA ITEAKL++TP+PK R +VN+KYDSF S
Sbjct: 240  FLTGYDLKNVWNETVDEFNLSRILTGSEGTLAVITEAKLDITPLPKTRMMVNIKYDSFQS 299

Query: 303  ALRNAPLMVEAKALSVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQGINMVEYAGQD 362
            ALR+AP +V+A+   VETVDSKVLNLAK+DIIWHSV  L+ DVPG  + G+NMVE+AG+ 
Sbjct: 300  ALRHAPDLVKAEVTVVETVDSKVLNLAKQDIIWHSVSSLIEDVPGASIDGLNMVEFAGEP 359

Query: 363  SAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAVGLLGAAKGRAK 422
              ++  +V QL A LD  +A  +AG++GYQV SD ASIN IY MRKKAVGLLGA KG  K
Sbjct: 360  D-EVEAKVKQLEAMLDTQLAANEAGLLGYQVTSDKASINTIYAMRKKAVGLLGATKGSRK 418

Query: 423  PVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPALDLCDPKQELL 482
            P+AF EDT VPPE LADFI+EFRALLDS  L YGMFGHVDAGVLHVRPALD+CDP+ E L
Sbjct: 419  PIAFAEDTAVPPEKLADFILEFRALLDSHELQYGMFGHVDAGVLHVRPALDMCDPQDERL 478

Query: 483  MREISDQVVKLVAKYGGLMWGEHGKGYRSEYGPEFFGEELFTELRRVKAAFDPHNKMNPG 542
            ++ +SDQV  L  KYGGLMWGEHGKG R EYGP  FGE LF  L  VK  FDP+NK+NPG
Sbjct: 479  LKTVSDQVAALTLKYGGLMWGEHGKGVRGEYGPSVFGETLFGLLEEVKGYFDPNNKLNPG 538

Query: 543  KICTPLDTPFELVKVSDTKRGFYDRQIDVKVRDSFKQAMECNGNGLCFNYETSSPMCPSM 602
            K+  P  +   L  V  TKRG +DRQI V  R++F   M CNGNGLCFNY   SPMCPS 
Sbjct: 539  KLVAPKGSGPLLYNVDSTKRGAFDRQIPVNTREAFPDVMNCNGNGLCFNYSVYSPMCPSF 598

Query: 603  KVTADRRHSPKGRAGLVREWLRQLTEQGIDILDLEKATLESSPTIKSMLDRVRHAFSKDK 662
            KVT DR  SPKGRAGL+REWLR L  +G+D+  L KA     P     L R ++   K++
Sbjct: 599  KVTGDRVQSPKGRAGLMREWLRLLEAEGVDVEALAKA----KPL--GWLQRTQNTLKKER 652

Query: 663  EYDFSHEVYEAMNGCLACKACASQCPIKVDVPSFRSRFLNIYHSRYPRPVKDYLVANIET 722
            EYD+SHEV E++ GCLACKAC+SQCP+KVDVP FR++F NIY+ RY RPVKDYLVA IE 
Sbjct: 653  EYDYSHEVMESLKGCLACKACSSQCPVKVDVPKFRAQFFNIYYQRYLRPVKDYLVAGIEE 712

Query: 723  LLPVMAKAPQLVNSVLAQSSVQKLTAKTVGYVDAPLLSVPTLAQRLRRHPVVLFDMQRLA 782
             LP+MAK PQ+ N        Q +  +++GYVDAP LSVPTL QRL  H    +D+  L 
Sbjct: 713  SLPLMAKVPQITNFASQNKLSQWVIKQSIGYVDAPALSVPTLKQRLENHACRGYDLNALQ 772

Query: 783  GLSQEEREQHVLIVQDPFTSYYDADVVEDFVALLLKLGKKPVLLPFKPNGKAQHIKGFLR 842
             + + ER+Q+VL+VQDPF S+Y+A+ V  F+ L+ KLG KPVLLPFKPNGK  HIKGFL 
Sbjct: 773  QIPEAERDQYVLVVQDPFNSFYEAETVYHFIKLIEKLGFKPVLLPFKPNGKPIHIKGFLD 832

Query: 843  QFRSTAANTAAFLTQVADLNIPLVGVDPALVLCYRDEYVEILGKERGEFSVLTVHEWLKP 902
            +F  TA ++A FL QV  L +P+VGVDPA+VLCYRDEY EIL + RG+F+VL  +EWL  
Sbjct: 833  KFAKTAQSSADFLNQVHALGMPMVGVDPAMVLCYRDEYKEILAENRGDFNVLLANEWLLK 892

Query: 903  RLSQFTPQVTDAQ--------------PWYLLAHCTEKTKLPNAEKEWVEIFRHFGTQLN 948
             +    P    A+               W+  +HCTE T  PN  KEW  IF  FG +L+
Sbjct: 893  VIDIVAPTAKSAKLNKSANATNANRQFTWF--SHCTESTAKPNTAKEWQAIFSAFGAELS 950

Query: 949  AVAVGCCGMAGTFGHEVDKLTMSRDIYDLSWQPALASLPKERCLVTGYSCRSQVKRFEQI 1008
             V++GCCGMAGT+GHE D L  S+ +Y++SW+ A+ SLP E+ L++GYSCRSQVKRF   
Sbjct: 951  TVSLGCCGMAGTYGHESDNLKRSKALYEMSWEKAIDSLPHEQILISGYSCRSQVKRFGGF 1010

Query: 1009 KPKHPLQALLHLL 1021
            KPKHP+QALL L+
Sbjct: 1011 KPKHPVQALLSLI 1023