Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 914 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  132 bits (332), Expect = 1e-34
 Identities = 165/700 (23%), Positives = 279/700 (39%), Gaps = 123/700 (17%)

Query: 48  RLAVATDNSVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLTK 107
           R A +TD S ++ +P+ VVH ++   V L   ++ K     VTF  R  GT  +GQ++ +
Sbjct: 8   RFAWSTDASYFRIVPEVVVHAETLEQVKLTLTVARKHNAP-VTF--RAAGTSLSGQAIGE 64

Query: 108 GVVVDLSRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGM 167
           G+++ L     R +E++     + + A VI    N  + P      PD +T   A +GG+
Sbjct: 65  GILLILGHDGFRKIEVSSDAKQITLGAAVIGSDANAVLAPLNRKIGPDPATIASAKIGGI 124

Query: 168 VNTDASGQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCR 227
           V  +ASG        +   + S + +FADG+ L+T   +          + +Q   ++  
Sbjct: 125 VANNASGMCCGTAQNSYQTIASAKLLFADGTELDTGCEKSKAEFAKTHGKLLQDLSELSH 184

Query: 228 TKR------KQIVAKFPPLNRFLTGYDLKNALNEAEDRFD-ITRVLCGAEGSLAFITEAK 280
             R      ++I  K+   N   TGY + N+L +  D FD I  ++ G EG+LAFI E  
Sbjct: 185 LTRHNSALAERIRKKYSIKN--TTGYGI-NSLIDFTDPFDIINHLMVGMEGTLAFINEVT 241

Query: 281 LNLTPIPKARTLVNVKYDSFDSALRNAPLMVEAKALSVETVDSKVLNLAKEDIIWHSVK- 339
            +     K +      + + + A R  PL+      + E +D            W S+K 
Sbjct: 242 YHTVNEAKFKASAMAVFHNMEDAARAIPLINGESVSAAELLD------------WPSIKA 289

Query: 340 --------DLLTDVPGKEMQGINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAG---I 388
                   D L+++P   +  I ++E    D+  +      +TA+L        AG   I
Sbjct: 290 VTGKPGMPDWLSELPA--LSAILLIESRADDAQTLEHYTQDVTAKL--------AGFDFI 339

Query: 389 IGYQVCSDLASINRIYNMRKKAVGLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALL 448
              +  ++ A  ++ + MRK    ++G  + +   V   ED     E+LA    +   L 
Sbjct: 340 RPMEFSTNPAVYDKYWAMRKGLFPIVGGERPKGTSV-IIEDVAFELEHLAAAAHDITELF 398

Query: 449 DSKNLAYG-MFGHVDAGVLH--VRPAL--DLCDPKQELLMREISDQVVKLVAKYGGLMWG 503
                  G ++GH  AG  H  + PA        +    M +I+D V+    KY G M  
Sbjct: 399 HKHGYPEGCIYGHALAGNFHFIITPAFTTQADIDRFHAFMDDIADMVIN---KYNGSMKA 455

Query: 504 EHGKGYR-SEYGPEFFGEELFTELRRVKAAFDPHNKMNPGKICTPLDTPFELVKVSDTKR 562
           EHG G   + +  + +G++ +T ++ +K  FDP   +NPG I                  
Sbjct: 456 EHGTGRAVAPFVEKEWGQDAYTLMKNIKQVFDPQGILNPGVILND--------------- 500

Query: 563 GFYDRQIDVK-------VRDSFKQAMECNGNGLCFNYETSSPMCPSMKVTADRRHSPKGR 615
              D  I VK       V D   + +EC   G C         CP    T+    SP+ R
Sbjct: 501 ---DSNIHVKNIKPCPVVDDFVDKCIEC---GFC------EKTCP----TSALNFSPRQR 544

Query: 616 AGLVREWLRQLTEQGIDILDLEKATLESSPTIKSMLDRVRHAFSKDKEYDFSHEVYEAMN 675
              +RE + +L + G           + +   K   D                  Y+ ++
Sbjct: 545 IATLRE-IERLEQSG-----------DKAAAAKMRAD----------------AKYDVID 576

Query: 676 GCLACKACASQCPIKVDVPSFRSRFLNIYHSRYPRPVKDY 715
            C AC+ C   CP+   +     +    Y S   + V D+
Sbjct: 577 TCAACQLCTIACPVDNSMGQLVRKLRTPYISTTEQKVLDF 616