Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., glycolate oxidase, subunit GlcD, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  137 bits (345), Expect = 2e-36
 Identities = 134/496 (27%), Positives = 215/496 (43%), Gaps = 78/496 (15%)

Query: 54  DNSVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQ--SLTKGVVV 111
           D S  +  P  VV P+S   +  + +++++  F  +   PRGGGTG  G   +L  GVV+
Sbjct: 36  DASELRATPDMVVLPESVGQIQALMRLATEHRFPVI---PRGGGTGLAGGCLALMGGVVL 92

Query: 112 DLSRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTD 171
            + R MNR+  I+ +     V AG I   L DA      F+ PD +  +R+T+GG V T+
Sbjct: 93  SVER-MNRVRAIDTRNLVAEVDAGCITQTLRDAAAAANLFYPPDPAGMDRSTVGGNVATN 151

Query: 172 ASGQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRK 231
           A G   ++YG T D+VL ++AV  DG LL   +                      RT RK
Sbjct: 152 AGGPACVKYGVTRDYVLGVEAVLPDGELLRAGV----------------------RT-RK 188

Query: 232 QIVAKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKART 291
            +V                         +D+  +LCG+EG+L  IT   + L P+P A  
Sbjct: 189 GVVG------------------------YDMAHLLCGSEGTLGVITGLTMKLIPLPAATV 224

Query: 292 LVNVKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKE 349
            + V +    SA+R    ++ A  L  ++E +D + L L  E + +         VPG  
Sbjct: 225 GMAVAFADMPSAMRAVAAVLGAGHLPSAIEFMDHRCLALVGEMLPF--------PVPGAR 276

Query: 350 MQGINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKK 409
              + ++E  GQ  A I  Q+  + A   E  A Q   ++     ++ A+   I+ +R++
Sbjct: 277 -PSLLIIELDGQ-RATIEPQLDAVAAICREQGATQ---VLPAPTDAERAT---IWGVRRQ 328

Query: 410 AVGLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVR 469
               +    G    +  +ED  VP   +AD + E  A  +   L    FGH   G +H+ 
Sbjct: 329 VSLRIHDYAG----LYLSEDVAVPLVAIADLVAELPAFEERYGLEIFAFGHAGDGNIHLN 384

Query: 470 PALDLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYRSEY-GPEFFGEELFTELRR 528
                 D ++     E    + + V + GG + GEHG G   ++  P           + 
Sbjct: 385 VTSSSTDNRER--AEEGVVALARRVVELGGTISGEHGIGEAKKHLVPLELSARSIALQKG 442

Query: 529 VKAAFDPHNKMNPGKI 544
           ++  FDP   MNPGK+
Sbjct: 443 IRGVFDPLGIMNPGKV 458