Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., glycolate oxidase, subunit GlcD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  128 bits (321), Expect = 1e-33
 Identities = 122/512 (23%), Positives = 212/512 (41%), Gaps = 78/512 (15%)

Query: 40  DIETQYSSRLAVATDNSVYQQL-PQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGT 98
           ++ T    R + A D++V  Q+ P  V+ P  T  +  + K+  + +      + RG GT
Sbjct: 18  NVFTSEPDRQSYAYDSAVLDQVVPALVLRPTETEQLGKLVKLCYENDHP---ITVRGAGT 74

Query: 99  GTNGQSLT---KGVVVDLSRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPD 155
             +G ++    +G+V+ L+  +N+I+EIN Q+ +  V+ GV+  +    V   G F+ PD
Sbjct: 75  NLSGGTIPDKREGIVI-LTNSLNKIIEINEQDLYAVVEPGVVTAKFAAEVAKRGLFYPPD 133

Query: 156 LSTSNRATLGGMVNTDASGQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFA 215
             +   +TLGG V  +A G   L+YG T D+V+ ++    +G L++T             
Sbjct: 134 PGSQAVSTLGGNVAENAGGLRGLKYGVTKDYVMGIEFFDVNGGLVKTG------------ 181

Query: 216 AQAMQVTEQVCRTKRKQIVAKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAF 275
                      RT +             +TGY+L               ++  +EG+L  
Sbjct: 182 ----------SRTVK------------CVTGYNLAG-------------LMAASEGTLGV 206

Query: 276 ITEAKLNLTPIPKARTLVNVKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDI 333
            ++  L L P PKA   +   +D  + A      ++ A  +  ++E +D   +N      
Sbjct: 207 FSQITLKLVPPPKASKAMMAVFDDVNKASEAVAAIIAAHVVPCTLEFMDKSSINY----- 261

Query: 334 IWHSVKDLLTDVPGKEMQGINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQV 393
               V+D       +E   I ++E  G   AQ+    A +   L+       +G     V
Sbjct: 262 ----VEDFTKAGLPREAAAILLIEVDGHP-AQVEDDAATVVKALNA------SGATEVHV 310

Query: 394 CSDLASINRIYNMRKKAVGLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNL 453
             D A   +++  R+ A+  L     RA+     ED  VP   +   +     +    N+
Sbjct: 311 AKDAAEKFKLWEARRNALPALA----RARATTVLEDATVPRSQIPAMVKAINDIAKKHNI 366

Query: 454 AYGMFGHVDAGVLHVRPALDLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGY-RSE 512
           A G FGH   G LH     D  D  +   +    D++  +     G + GEHG G  +S+
Sbjct: 367 AIGTFGHAGDGNLHPTILCDRRDKHEFERVESAVDEIFDVALSLHGTLSGEHGIGLAKSK 426

Query: 513 YGPEFFGEELFTELRRVKAAFDPHNKMNPGKI 544
           +  +   +      R +K A DP   +NPGKI
Sbjct: 427 WMEKETSKATIEYSRNMKRAIDPKYILNPGKI 458