Pairwise Alignments

Query, 231 a.a., DUF3334 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  260 bits (665), Expect = 1e-74
 Identities = 136/247 (55%), Positives = 174/247 (70%), Gaps = 25/247 (10%)

Query: 5   MKKNQIVTTEDILLMLCQSVSTVLTSATNSPIHYSAMVQKINKTSLKPDFGCFVLFDGGF 64
           M  N IV ++DILL LC SV+ VL+S + S + ++ MVQ I +T LKPD GCF +FDGGF
Sbjct: 1   MTTNTIVNSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSIARTRLKPDLGCFSIFDGGF 60

Query: 65  TGLVVINFTAKAALEVYTNYMRNMGMPEEELAVLHTSDEVGDVLGELMNQLVGDFTNKVR 124
           +GLVVINF+A AA+E+Y  YM NMGMPEEELA  HTSDEVG+V+GELMNQ++GDF NK+ 
Sbjct: 61  SGLVVINFSAPAAIEIYRRYMLNMGMPEEELAFSHTSDEVGNVMGELMNQILGDFINKIS 120

Query: 125 KELQTNITQNQPKMLSLNKQVLLSVDTNLDRPQARRVTFSTANNNIFYLELAMDKTEFIQ 184
           KELQT+I+Q+QPKML++NK++ +S+D NLD   ARRV+F T NN+IFYLE AMDKTEFI+
Sbjct: 121 KELQTSISQSQPKMLTINKELTISIDANLDEAVARRVSFKTENNHIFYLEFAMDKTEFIK 180

Query: 185 LEEFDVQEDESPDDILAATQKQQKSHSVANHSEEDSASA--------------------D 224
           L+EF+  E+  PD +L     +Q   S A  S  DS +                     D
Sbjct: 181 LDEFEYDEEFDPDSLL-----EQHGMSGAQASNADSITPWSRIADKPAISQQYTNMDADD 235

Query: 225 LLDQLGI 231
           LLD+LGI
Sbjct: 236 LLDELGI 242