Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., Outer membrane lipoprotein omp16 precursor from Pseudomonas fluorescens FW300-N2E2

 Score = 95.9 bits (237), Expect = 6e-25
 Identities = 81/238 (34%), Positives = 111/238 (46%), Gaps = 27/238 (11%)

Query: 8   LLAAVVALSGCQATQRQNATTGETETN------ATTKGALLGVLAGAAVGLATGDDA--- 58
           LLAA VAL+ C      N     T  N      A TK A L     AA  LA  D A   
Sbjct: 11  LLAACVALAACSHDPNANLEQARTNYNGLQADPAATKVAALET-KDAADFLAKADKAYMD 69

Query: 59  --KERRKHALIGAAGGAAVGGGIGYYFDQQEAELR-------KALLDS-GVQVVRVGENQ 108
              E +   L                    EAEL+       +ALLD+   Q+ ++ ++ 
Sbjct: 70  KEDEAKVDQLAYLTNQRVEVAKQTIALRNAEAELKNAGDERARALLDARNAQIKQLQDSL 129

Query: 109 LMLRMENG-------IGFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSD 161
              + E G       + F +N   L +     +  +A+ L E PD  ++IEG+TDSTGSD
Sbjct: 130 NAKQTERGTLVTFGDVLFATNKSDLRASGMTNVNKLAQFLQENPDRKVIIEGYTDSTGSD 189

Query: 162 TTNQVLSEKRAESVRSFLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQI 219
           + NQ LSE+RA SVR  L++ GV   R + +G G+ FP+  N +  GRA NRRVE+ I
Sbjct: 190 SYNQSLSERRANSVRMALVNMGVNMDRIVTQGYGKEFPVADNTSVSGRAMNRRVEVTI 247