Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

 Score =  139 bits (351), Expect = 3e-38
 Identities = 89/220 (40%), Positives = 123/220 (55%), Gaps = 8/220 (3%)

Query: 7   LLLAAVVALSGCQATQRQNATTGETETNA----TTKGALLGVLAGAAVGLATGDDAKERR 62
           ++  AV  LSGC AT       G+ +++     T K   LG LAGA  G A   D   R 
Sbjct: 9   IVATAVAMLSGC-ATSNPYDNQGQAQSSGGMSKTAKYGGLGALAGAVAGAAI--DHNHRG 65

Query: 63  KHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFTSN 122
           K ALIGAA   A   G GYY D+QEA LR+++ ++GV+V R G+ Q+ L M   I F ++
Sbjct: 66  KGALIGAAVAGAASAGYGYYADKQEAALRESMANTGVEVQRQGD-QIKLIMPGNITFATD 124

Query: 123 SYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLLSQ 182
           S  + S  +  L  +A  L ++   ++ I G+TDSTGS   N  LS++RA+SV ++L SQ
Sbjct: 125 SSAIASSFYSPLNNLASSLKQFNQNNIEIVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQ 184

Query: 183 GVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQILPL 222
           GV       RG G   P+ SN    GRA NRRVE+ + P+
Sbjct: 185 GVDQAHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLKPI 224