Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., OmpA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  174 bits (441), Expect = 1e-48
 Identities = 107/226 (47%), Positives = 138/226 (61%), Gaps = 9/226 (3%)

Query: 1   MLNKTTLLLAAVVALS----GCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGD 56
           M  K  L L  V AL+    GC      N  T E +T   T GA++G +AGAAVG+A+  
Sbjct: 1   MNKKAILTLTGVFALAAMGTGCSTV---NPYTNEQQTANATTGAIIGAVAGAAVGVASSS 57

Query: 57  DAKERRKHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENG 116
            + +R K ALIGAA GAAVGGGIGYY D QE +LR+ L  SGV V R G+N ++L M N 
Sbjct: 58  KS-DRGKGALIGAASGAAVGGGIGYYMDVQETKLRQQLQASGVSVTRNGDN-IILNMPND 115

Query: 117 IGFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVR 176
           + F  +   L     + L  VA +  EY  T L + G+TDS+G+D+ N  LS+ RA  V 
Sbjct: 116 VTFAVDKTDLSPRAMQVLDSVALVAKEYSKTRLNVLGYTDSSGADSYNLRLSQVRASEVG 175

Query: 177 SFLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQILPL 222
           ++LLS+GVAA R   +G GE  P+ SN TAEGRA NRRVEI + P+
Sbjct: 176 NYLLSKGVAAARVSTQGMGEASPIASNATAEGRAQNRRVEIILTPI 221