Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., OmpA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 39/242 (16%)

Query: 6   TLLLAAVVALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKERRKHA 65
           T LLA+V++L    A     A   E + N    G   G L GAAVG   G         A
Sbjct: 3   TQLLASVISL----ALIAPAANAAERDHNEELVGLGSGALIGAAVGGPVG---------A 49

Query: 66  LIGAAGGAAVGGGIG---------YYFDQQEAELRKAL--------LDSGVQVVRVGENQ 108
           +IGA  G  +G  +G              Q+AE+ +          L S   + R   N 
Sbjct: 50  IIGAFAGGIIGKSVGDEEEINDHKQALATQDAEIERLAQKSANYDALASDYAITRAQLNT 109

Query: 109 LMLRMEN---------GIGFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTG 159
           L    E           + F + S  ++ +    L+ VAR++   PD  + ++G  D  G
Sbjct: 110 LQTAREAKLTELTLGLNVQFKTGSSDIEPHFQNQLQAVARVMEAQPDLVIDLKGFADRRG 169

Query: 160 SDTTNQVLSEKRAESVRSFLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQI 219
               NQ LSE+R  +V+++L+S GVA+ R   +  G   PL ++   E    +RRV +++
Sbjct: 170 DSDYNQALSEQRLANVKAYLVSAGVASDRLQGKAFGATAPLSADAGFESDFFDRRVTLEL 229

Query: 220 LP 221
           +P
Sbjct: 230 VP 231