Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  166 bits (421), Expect = 3e-46
 Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 10/220 (4%)

Query: 8   LLAAVVA-----LSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKERR 62
           L+AA++A     +S CQ T   N  T E++    T GA++G +AGAA+G+A+   + +R 
Sbjct: 7   LVAAILAGSTLFISACQTT---NPYTNESQNAKATNGAIIGAIAGAAIGVASSSKS-DRG 62

Query: 63  KHALIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFTSN 122
           K ALIGAA GAAVGGGIGYY D QEAELRK L  +GV V R G+N ++L M N + F  +
Sbjct: 63  KGALIGAASGAAVGGGIGYYMDVQEAELRKQLQSTGVSVTRNGDN-IILNMPNEVTFGVD 121

Query: 123 SYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLLSQ 182
              L S     L  VA +  EY +T L + G TDS+GS++ N  LS+ RA  V ++L+S+
Sbjct: 122 QSVLSSRAKNVLDSVALVAKEYDETMLNVMGFTDSSGSESYNLRLSQVRAAEVANYLMSR 181

Query: 183 GVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQILPL 222
            + + R  + G GE  P+  N+T +GRA NRRVEI + P+
Sbjct: 182 EIKSQRISSVGMGESRPIADNSTQQGRAQNRRVEIVLSPM 221