Pairwise Alignments

Query, 223 a.a., lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., outer membrane protein from Caulobacter crescentus NA1000

 Score =  145 bits (365), Expect = 8e-40
 Identities = 91/218 (41%), Positives = 124/218 (56%), Gaps = 6/218 (2%)

Query: 7   LLLAAVVALSGCQATQRQNATTGETETNATTKGALLGVLAGAAVGLATGDDAKER-RKHA 65
           ++L +  AL+ C  T   +  TG    N T  GAL G   GA +G  T  +  E+ RK+A
Sbjct: 12  VVLMSAGALAACTTT---DPYTGMPVRNNTGTGALTGAGVGAVLGYLTNTNKGEQGRKNA 68

Query: 66  LIGAAGGAAVGGGIGYYFDQQEAELRKALLDSGVQVVRVGENQLMLRMENGIGFTSNSYQ 125
           LIGA  GA  GG IG Y D+Q+A+ R++L  SGV + R G+ Q++L M + + F  +   
Sbjct: 69  LIGAGIGALAGGAIGNYMDRQQADFRRSLEGSGVMIRRNGD-QIVLVMPSDVTFAVDRSD 127

Query: 126 LDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQVLSEKRAESVRSFLLSQ-GV 184
           +     + L  VAR L  YP T++ + GH DS+G D  NQ LSE+RA +V  +L    GV
Sbjct: 128 VQPPFTRVLDDVARTLNAYPQTTIDVVGHADSSGPDDYNQTLSERRASAVAGYLTGPGGV 187

Query: 185 AAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQILPL 222
              R    G GER P+  N TA+GRA NRRVEI + PL
Sbjct: 188 LVDRVFVAGMGERAPIADNATADGRAQNRRVEIILRPL 225