Pairwise Alignments

Query, 350 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., Sel1 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 47.8 bits (112), Expect = 9e-10
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 39  QLAQEQNPQAQYQLALTYQTGSSTPQNLNE-AFYWFLQSAELNHPPAMAQVANAYLTGQG 97
           + A E  P+AQ +L L Y  G+   +  NE AF W+L++A+     A+  +A  Y  G+ 
Sbjct: 71  EAANEGLPRAQSELGLIYDVGALGTKEDNELAFKWYLKAAKQKDTQALINLAAFYRNGEF 130

Query: 98  VEKDPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNANQDPES 155
           VE+D  QA  +  +     +P A   L   Y   P     L LAE  + + ANQ   S
Sbjct: 131 VEQDLDQAIDYYRQAISLNDPIAFCELGFLYLDEPLK-KDLQLAETNFLLGANQQQTS 187



 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 25/73 (34%), Positives = 39/73 (53%)

Query: 41  AQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVEK 100
           A   N QA Y L + Y+ G++  ++  +A  +F Q+A+L    A  +V  AY  G G EK
Sbjct: 358 ATMNNTQALYNLGIIYRDGNTVKRDRAKALSFFQQAADLGLERAYFEVGKAYHLGLGTEK 417

Query: 101 DPLQAQYWLIKLA 113
           +   A  +L+K A
Sbjct: 418 NDQLALPYLLKSA 430



 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 31/112 (27%), Positives = 50/112 (44%)

Query: 41  AQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVEK 100
           A   +  AQY LA  Y  G +T  +  +  ++   + E NH  A   +AN Y  G  VE+
Sbjct: 214 ADAGDASAQYNLATLYFDGIATEVDPKQGIHYLQLAVEQNHGSATGYLANMYDFGWFVEQ 273

Query: 101 DPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNANQD 152
           D   A     + A  G+  +   LA ++E        +D+A   Y++ A Q+
Sbjct: 274 DKKLAIQLYQRAAELGDAGSMVNLATFFESGQFVPQDIDMALQLYQLAAQQN 325



 Score = 37.7 bits (86), Expect = 9e-07
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 8/126 (6%)

Query: 42  QEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELN-HPPAMAQVANAYLTGQGVEK 100
           ++Q+  A   L   Y+ G    Q++ +A   +  + E +    AM  ++  YL G+GV  
Sbjct: 574 KQQDSTAANNLGEMYRLGLGVEQDIEQAISLYQSAVEWHGQATAMLNLSELYLEGEGVPV 633

Query: 101 DPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNANQDPESEQGYA 160
           D      WL K A   N +A   L K+        A     +IW   +A+   E    Y 
Sbjct: 634 DEKLGLSWLKKAAETDNSEAQYRLGKYLLDRNVTSA----GKIWMSRSADAGNEKAIEY- 688

Query: 161 RLLEQK 166
             L+QK
Sbjct: 689 --LQQK 692



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 21/146 (14%)

Query: 52  LALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVEKDPLQAQYWLIK 111
           L   Y+ GS +  +++ A  W+ +  +  HP A  ++A  Y+ G+GV K           
Sbjct: 476 LGQIYEFGSPSHHDVDLAIAWYKKGIKGEHPYAYMRLALLYMNGEGVAK----------- 524

Query: 112 LALAGNPQAGTTLAKWYEQHPTAIAALDLAEIWYRVNANQDPESEQGYARLLEQKFNQQR 171
                N Q G  L   Y +       + L  +++    NQ  +  Q      E    QQ 
Sbjct: 525 -----NMQHGLELYSTYCKLRKYNENMKLGNLFF--FGNQIKQDYQQARYFYELALKQQD 577

Query: 172 ERQLNSIGQLDNL---IDRDLARPAS 194
               N++G++  L   +++D+ +  S
Sbjct: 578 STAANNLGEMYRLGLGVEQDIEQAIS 603



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 52  LALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQGVEKDPLQAQYWLIK 111
           LA  +++G   PQ+++ A   +  +A+ N+  A+  +A+ Y  G+ VE++         K
Sbjct: 297 LATFFESGQFVPQDIDMALQLYQLAAQQNNALALNNMASIYFNGEYVERNTELGLELFNK 356

Query: 112 LALAGNPQA 120
            A   N QA
Sbjct: 357 AATMNNTQA 365



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 3/110 (2%)

Query: 21  FLLFSLPLAAADDVTRLTQLAQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELN 80
           FL    PL     +     L      Q    L L Y       + + ++  W+  +A+  
Sbjct: 159 FLYLDEPLKKDLQLAETNFLLGANQQQTSCYLGLAYLFHFEKDK-VKQSLKWYQLAADAG 217

Query: 81  HPPAMAQVANAYLTGQGVEKDPLQAQYWLIKLALAGNPQAGT-TLAKWYE 129
              A   +A  Y  G   E DP Q  ++L +LA+  N  + T  LA  Y+
Sbjct: 218 DASAQYNLATLYFDGIATEVDPKQGIHYL-QLAVEQNHGSATGYLANMYD 266