Pairwise Alignments

Query, 350 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., conserved domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 9/107 (8%)

Query: 41  AQEQNPQAQYQLALTYQTGSSTPQNLNEAFYWFLQSAELNHPPAMAQVANAYLTGQ-GVE 99
           A+  +P+AQY  A          ++  EA +W+ ++ E NH  A+ Q+A  Y  G+ G+E
Sbjct: 117 AEHGDPEAQYYTA-------QDCEDKTEALFWYRKAGEQNHYWALYQIALMYEAGEGGLE 169

Query: 100 KDPLQAQYWLIKLALAGNPQAGTTLAKWYEQHPTAIAA-LDLAEIWY 145
           KD  QA  W  K A  G+  A   LA+ YE+    I   L LA  WY
Sbjct: 170 KDFAQAILWRGKAAEQGSDAAARDLAEMYEEGTADIPQDLTLAIFWY 216