Pairwise Alignments

Query, 254 a.a., vancomycin high temperature exclusion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., putative protein involved in barrier function of the cell envelope (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  146 bits (368), Expect = 4e-40
 Identities = 84/206 (40%), Positives = 116/206 (56%), Gaps = 2/206 (0%)

Query: 28  RKLSQTLLWLTIGVVAGLLAIDRWVSWQTQNNIINDAQNTPPFQVAVVLGTS-KYIGKTL 86
           +KL    L + I  V  +   D  +     + I  +  + P   V ++LGTS K      
Sbjct: 3   KKLFYITLIIAILCVISIFICDWTIKKNAASCIYTEISDIPANNVGLLLGTSPKLKSGNN 62

Query: 87  NEYYTNRIDAAIALYQQGKVRNFLLSGDNAHRSYNEPWTMKRDLLRAGIPAENISLDYAG 146
           N Y+  RIDAA+ LY+ GK+   L+SGDN    YNEP  MK+ L++ G+P ++I LDYAG
Sbjct: 63  NLYFDYRIDAAVELYKAGKINYILISGDNRKEDYNEPEEMKKALMQKGVPEKSIYLDYAG 122

Query: 147 FRTLDSIVRAKEIFDTDNFLIITQRFHCERALFIARYQDIQASCLAVPGPSNHSGFKVRL 206
           FRTLDS+VRAKE+F      II+QRFH ERA+++A    I A          ++G +  +
Sbjct: 123 FRTLDSVVRAKEVFGQTRLTIISQRFHNERAIYLAEKNGITAIGFNARDVDVYAGLRTNI 182

Query: 207 REVFARAYAVFDLFVLDTQPKFLGPK 232
           RE+FAR     DL  +D QP FLG K
Sbjct: 183 RELFARVKMFIDL-AIDKQPHFLGEK 207