Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  112 bits (279), Expect = 3e-29
 Identities = 87/299 (29%), Positives = 146/299 (48%), Gaps = 43/299 (14%)

Query: 148 VGKGVIDIPIRSLQVMTW------WL----------VDN--RIAIEHSAPEFSNVNKIEF 189
           V +G  D+ IRSL V  +      WL           DN  RI + +S P   ++  ++ 
Sbjct: 183 VSEGKADLTIRSLTVAAYTIRHDGWLNLKIAGQVSGFDNQFRIGVLNSEPLLRDI--LDK 240

Query: 190 ATGSASPLGQYQLTLHQVELIGDYVAGEKLFLAMLIMWAVAGAWLSALEIRRNRREVLRA 249
           A  + +P+   Q+    V +  +     +L + M+++++V                +L +
Sbjct: 241 AIATVTPVELNQIANRHVPIRVETATDYRLVVQMVVVFSVV---------------LLTS 285

Query: 250 RMRQEHLQRLNHSLHEQNIKFVEMAHRDALTGAINRHGIRDWLQDQARLVRWQLNHVSVL 309
                 L+RLN  L  ++         D+LTG  NR  +           R     +S++
Sbjct: 286 LFWIGRLRRLNEQLQIKS-------QTDSLTGLANRSALDGRFAVALEQARRYHRPLSIV 338

Query: 310 FIDIDYFKQVNDVYGHSLGDDLLREFALVISREIRESDKLVRWGGEEFVVFCAQTTLEQA 369
            +DID+FK++ND +GH +GD +LRE A ++   +R +D + RWGGEEF+V C +T   QA
Sbjct: 339 MLDIDHFKRINDEFGHQMGDRVLREIAGLLQSCLRGTDAVGRWGGEEFLVLCPETNGLQA 398

Query: 370 IELAERLRAKIADHSWIHGGAITCSIGIAQMGDERITET-VSRADEALYRAKRLGRNRI 427
              AER+  ++    +  G   + S G+A++     T++ + RAD ALYRAKR GR+R+
Sbjct: 399 EVFAERICEQVRAFPFSTGQRQSLSAGVAELIPADTTDSLLRRADAALYRAKRGGRDRV 457