Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  107 bits (267), Expect = 5e-28
 Identities = 69/175 (39%), Positives = 97/175 (55%), Gaps = 14/175 (8%)

Query: 260 NHSLHEQNIKFVEMAHRDALTGAINRHGIRDWLQDQARLVRWQLNHVSVLFIDIDYFKQV 319
           +H L +Q++   ++A  D LTGA+NR   +         V           +D+D+FK++
Sbjct: 121 HHQLVQQSL-LKKIAATDPLTGALNRRAFKAPKTHSGSTV--------FALVDVDHFKRI 171

Query: 320 NDVYGHSLGDDLLREFALVISREIRESDKLVRWGGEEFVVFCAQTTLEQAIELAERLRAK 379
           ND YGH  GD +L E A +IS  IRE D+  RWGGEEF++   Q  L QA +  E LR  
Sbjct: 172 NDTYGHDAGDFVLVELAKLISNHIREDDQFFRWGGEEFLLEFRQAELAQASKRMEALRQL 231

Query: 380 I-ADHSWIHGGA--ITCSIGIAQMGDER--ITETVSRADEALYRAKRLGRNRIEV 429
           + + H  ++G A  IT S G+  +      + + +  ADEALYRAK  GRNRIEV
Sbjct: 232 VESSHFNLNGQAINITISAGLTCVSPNHGGLEKALKAADEALYRAKDSGRNRIEV 286