Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (288), Expect = 4e-30
 Identities = 80/218 (36%), Positives = 114/218 (52%), Gaps = 19/218 (8%)

Query: 232 AWLSALEIRRNRREVLRA---------RMRQEHLQRLN---HSLHEQNIKFVEMAHRDAL 279
           A L A  IR+ R E L+          +M QE    L      L+E N K  E    D+L
Sbjct: 399 ALLQAQRIRQAREEALQIEADSNERLEQMVQERTLELEIALRELNEANQKLTEQNTVDSL 458

Query: 280 TGAINRHGIRDWLQDQARLVRWQLNHVSVLFIDIDYFKQVNDVYGHSLGDDLLREFALVI 339
           TG  NR      LQ + RL R Q   +++L IDID FK +ND YGH  GD  L+  A  +
Sbjct: 459 TGVKNRAAFEKRLQAEGRLSRRQQTPLAILMIDIDRFKAINDTYGHLAGDQALKTIAQAL 518

Query: 340 SREIRE-SDKLVRWGGEEFVVFCAQTTLEQAIELAERLRAKIADHSWIHGG---AITCSI 395
             ++R  SD + R+GGEEF +    T+ + A+++AE +R+ +++     G     +T SI
Sbjct: 519 KEKLRRPSDLVSRFGGEEFAMILPNTSCDGALQVAELMRSTVSELPLAWGEQAIPLTISI 578

Query: 396 GIAQ---MGDERITETVSRADEALYRAKRLGRNRIEVH 430
           GI     + D+     V +AD+ALYRAK  GRNR+ V+
Sbjct: 579 GICAEVIVDDQHTQLLVDQADKALYRAKHEGRNRVCVY 616