Pairwise Alignments

Query, 443 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  101 bits (251), Expect = 4e-26
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)

Query: 256 LQRLNHSLHEQNIKFVEMAHRDALTGAINRHGIRDWLQDQARLVRWQLNHVSVLFIDIDY 315
           LQ L +++  Q +    M   DALTG  NRH     L++     + +   VS++ +D+D 
Sbjct: 119 LQPLLNAMQYQEMSMQAMF--DALTGLGNRHYYSQSLKNAVARAQRKQGSVSLIVLDLDN 176

Query: 316 FKQVNDVYGHSLGDDLLREFALVISREIRESDKLVRWGGEEFVVFCAQTTLEQAIELAER 375
           FK++ND YGH  GD +L+EF  +I   IR +D+  R GG+EFVV   Q  +  A  L ER
Sbjct: 177 FKKLNDKYGHKCGDYILKEFGDIIRSSIRSTDQAFRIGGDEFVVI-VQGNIHAAGLLCER 235

Query: 376 LRAKIADHSWIHGGAITCSIGIAQMGDERITETV-SRADEALYRAKRLGRN 425
           + +    H+  H   ++CS+G A+  +    E +  +AD+ LY+AK  GRN
Sbjct: 236 IVSATNTHASFHQFGVSCSLGAAEASETMEAEQLYEQADKTLYQAKASGRN 286