Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  161 bits (408), Expect = 6e-44
 Identities = 126/480 (26%), Positives = 231/480 (48%), Gaps = 19/480 (3%)

Query: 106 LRDLGPAYIKGKPAGSWAALM---LEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVN 162
           L++L  ++ + +  G   +++   + Q+E   D  A  + Q++ +VL     +A + P  
Sbjct: 111 LQELELSFFEERSTGQLLSVLNDDINQLERFLDHGANEILQVTTTVLAVGGAMAYLSPT- 169

Query: 163 WAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTT 222
             AGL  +L  P++         + A    +  +    +S    + L  + TI+ F    
Sbjct: 170 -VAGLA-ILPIPVILWGSLRFQRRLAPRYARVREQAGLISARLANNLGGIATIKSFTAEA 227

Query: 223 AETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYG 282
            E   +   S+ +R       R   LSSA   F   I  A+   +    Y+G +      
Sbjct: 228 FEKGRVAEDSDAYRQANR---RAIALSSA---FVPLIRFAILFAFIAILYVGGMETINGR 281

Query: 283 ASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHL 342
             V  ++  F++ +      PL  LG      Q A+ + + ++D L   V  + SG + L
Sbjct: 282 LDVGTYS--FLVFITQRLLWPLTSLGRVLDDYQRAMASTQRVMDLLAIPVQ-IPSGRQSL 338

Query: 343 SDNDDIEIIANDLVVLSPQGKRLAG-PLSFTLQSGKTTALVGPSGAGKTSLINTILGFM- 400
                   +  + +  + + +  +   L+  + +G+T A+VG +G+GK++L+  +L F  
Sbjct: 339 PIGQVQGAVQFEGITFAYRDREPSVIDLNLNIPAGQTIAIVGATGSGKSTLVKLLLRFYE 398

Query: 401 PYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQ 460
           P  G + ++GI+LR+L     RQ I +V Q+  L +G++ +N+  G  +    ++ Q  +
Sbjct: 399 PQTGRILLDGIDLRDLKLKDLRQAIGFVSQDVFLFHGSVAENIAYGSFDATQTEIEQAAK 458

Query: 461 AAYAQEFVEQ--QGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARS 518
            A A EF+    QG D  + +R   LS GQ QRLA+ARAIL++    +LDE T+++D  +
Sbjct: 459 LAEAHEFIMDLPQGYDTVVGERGQKLSGGQRQRLAIARAILKDPPILILDEATSAVDNET 518

Query: 519 EQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATM 578
           E  + R L +  + RT L + H+L  ++  + I VM+ G LV+AGH ++L    GL+A +
Sbjct: 519 EAAIQRSLEQITRDRTTLAIAHRLSTIRHADCIYVMDQGRLVEAGHHDELLALDGLYANL 578