Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) from Shewanella amazonensis SB2B

 Score =  577 bits (1487), Expect = e-169
 Identities = 296/582 (50%), Positives = 410/582 (70%), Gaps = 6/582 (1%)

Query: 1   MDKKKQRSLNLWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKH 60
           MDK  ++ L LWLK +      +L ++V LG+ + L L+ QA LLA +L  ++++     
Sbjct: 1   MDKSLEKQLALWLKSRKAACGPFLLLSVALGLFAGLLLIGQAWLLARMLSAVVMQGETIQ 60

Query: 61  LLIPHFFGLAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAG 120
            L      L  LI  RA+ +W RE   F  G  +R  +R  +L+ L  LGPA+IKGKP G
Sbjct: 61  ALGAEIAALLGLIIARAIVAWARERVSFEAGRRLRTELRAAVLNHLSALGPAFIKGKPLG 120

Query: 121 SWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFM 180
           SW A++LEQ+E++HDF+ARYLPQ+SL+ L+P VILA VFP+NWAAGLI L TAPL+PLFM
Sbjct: 121 SWGAVVLEQIEDLHDFYARYLPQLSLAALIPLVILACVFPLNWAAGLILLGTAPLIPLFM 180

Query: 181 ALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTM 240
            LVG+ AADA+RK+F AL RLSGHF DRL+ + T+RLFDR  AE   +  AS+ FR RTM
Sbjct: 181 ILVGMGAADANRKHFAALSRLSGHFMDRLRGIVTLRLFDRAEAEGRAIEKASDEFRSRTM 240

Query: 241 DVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEF 300
            VLR+AFLSSAVLEFF ++S+AL AVYFGFSY+G L+FG+YG S++LF GLFVL+LAPEF
Sbjct: 241 AVLRMAFLSSAVLEFFAAVSLALVAVYFGFSYLGHLDFGHYGQSISLFTGLFVLMLAPEF 300

Query: 301 YQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSP 360
           YQPLRD+GT+YHAK  AV AAE++ + L  + DT   G++ L  + DIE  A DL + S 
Sbjct: 301 YQPLRDMGTHYHAKAQAVAAAEALSELLAIDTDT-QQGKQPLPHHLDIE--ARDLCIYSH 357

Query: 361 QGKRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPYQGSLTINGIELRELDHAQ 420
           QG  +AGPLSF+++ G+  A+VGPSGAGK+SL++ +LGF+P +G+LT+ G+   ELD  Q
Sbjct: 358 QGALIAGPLSFSVRQGERLAIVGPSGAGKSSLLHALLGFLPCKGTLTVGGMPFTELDMGQ 417

Query: 421 WRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFV--EQQGLDYPIS 478
           WR  ++W+GQ P L +G+IRDN+ +G+  + DEQ+ Q L  A   +FV     GL + I+
Sbjct: 418 WRGAVAWLGQEPHLFHGSIRDNIAMGR-ALGDEQIQQLLAKAQIADFVAGSADGLSHAIA 476

Query: 479 DRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFV 538
           +   G+SVGQAQRLALARA+    + +LLDEP ASLD  SE+ VM  +    +  + + V
Sbjct: 477 EGGGGVSVGQAQRLALARALAGQPQVFLLDEPGASLDVDSERKVMESIMRESEGLSLVMV 536

Query: 539 THQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATMLA 580
           +H+L+ L  ++++LVM+ G +V++G   +L+  +GLFA +L+
Sbjct: 537 SHRLEALTQLDRVLVMDGGAIVESGTAIELANANGLFADLLS 578