Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., ABC transporter, ATP-binding protein MsbA (RefSeq) from Shewanella amazonensis SB2B

 Score =  156 bits (394), Expect = 3e-42
 Identities = 126/491 (25%), Positives = 225/491 (45%), Gaps = 24/491 (4%)

Query: 98  IRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAV 157
           +RQ + +    L  +YI  + +G+  + +    E +       L  +    +    +L +
Sbjct: 116 MRQQVFEHYLTLPVSYIDKENSGNLISRVTFDTEQIARASGSALISIVRDGVTVIGMLGL 175

Query: 158 VFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRL 217
           +F  +W   L  L+  P++ L +A V  +    SR+   A+  ++      ++    +  
Sbjct: 176 MFYNSWKLSLCILIVGPIIGLVIATVSRRFRKISRQIQSAMGGVTAVTEQMIKGHKNVLA 235

Query: 218 FDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELN 277
           F     E +     ++  RH+ M +     +S   +    S ++A       F  +    
Sbjct: 236 FGGQETEAKRFAQVNDHNRHQNMKLAVAQAISQPTIMIIGSFALAFVLYAASFDALKS-- 293

Query: 278 FGYYGASVTLFAGLFVLILAPEF--YQPLRDLGTYYHAKQLAVGAAESIVDFLQT--EVD 333
                    L AG F  +LA      QP+++L       Q  + A  ++ + L T  E D
Sbjct: 294 --------ELTAGTFATVLAAMMATLQPIKNLTRVNAEFQRGIAACTTVFELLDTPAEHD 345

Query: 334 TLHSGERHLSDNDDIEIIANDLVVLSPQGKRLAGPLSFTLQSGKTTALVGPSGAGKT--- 390
                   +  +   E +A        +G+ L G +SF +  GKT ALVG SG+GK+   
Sbjct: 346 KGTFETERVKGHVRFEQVA--FRYEGQEGRALDG-ISFDVPPGKTLALVGRSGSGKSTIA 402

Query: 391 SLINTILGFMPYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLG-KHN 449
           SLIN   G +  QG++ ++G+ + +      R  ++ V Q   L   TI +N+       
Sbjct: 403 SLINRFYGGLE-QGAIELDGVNVEDYRLKNLRSQVALVSQQVTLFNDTIANNIAYACPWA 461

Query: 450 IADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLL 507
           +  EQ+ Q    A+A EF+ +   GLD  + +    LS GQ QR+A+ARA+L+N    +L
Sbjct: 462 VTREQIEQAATLAHAMEFISKLPSGLDTQVGENGVLLSGGQRQRIAIARAMLRNAPVLIL 521

Query: 508 DEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFED 567
           DE T++LD  SE+ +  GL    Q RT++ + H+L  ++S ++ILV+E G +V+ G+ + 
Sbjct: 522 DEATSALDTESEKAIQEGLENLRQNRTSIVIAHRLSTIESADEILVIEQGRIVERGNHKS 581

Query: 568 LSQQSGLFATM 578
           L  Q G++A +
Sbjct: 582 LLAQDGMYAKL 592