Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (393), Expect = 3e-42
 Identities = 146/578 (25%), Positives = 267/578 (46%), Gaps = 31/578 (5%)

Query: 19  LAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKH-----LLIPHFFGLAALI 73
           LA++W  IA  L VL  L + A  + +A ++   + +   +H     +LI   F +A ++
Sbjct: 31  LAQQWGLIA--LAVLCMLAVAASTSAIAWLMKPAVNDVFARHDRDVLMLIALAFPVAFVL 88

Query: 74  AVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENM 133
             + L ++G+     R G  + +  R+ + D L+ +  A+   +   +  +     +  +
Sbjct: 89  --KGLANYGQRTLMNRVGLRVVQRCREALYDHLQGMDIAFFAQQQTAALVSRFTVDLTLL 146

Query: 134 HDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRK 193
            +     +  +    +    ++  +F ++    LI +   P   L +AL+G +   A+R 
Sbjct: 147 KNTITSGIMVVGRDAVTMVSLVVSLFLLDIELALIAVTVFPAAVLPIALLGKRVRKAARG 206

Query: 194 NFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEV---FRHRTMDVLRIAFLSS 250
                 +L        QA+  +++++    E E  R A+ V   +RH  M   RI    S
Sbjct: 207 MQAQSGQLDALLLQVFQAIRVVKVYN--AGEHERARVAATVDRIYRH-LMRSERIGAAIS 263

Query: 251 AVLEFFTSISIALTAVYFGFSYI-GELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGT 309
            V+E  +  + A   +Y G     G+L+ G + A +T    LF+L      YQP++ +G 
Sbjct: 264 MVVEILSGFAFAAVVIYGGQRVTAGDLDPGTFFAFIT---SLFLL------YQPIKRIGG 314

Query: 310 YYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSP--QGKRLAG 367
                Q  + A E +   + T        +         EI+ +D+ +  P  +G  L G
Sbjct: 315 VNVVAQEGMAAVERMYGVIDTPPALREGKDAPALVVGGGEIVFDDVRLTYPTQEGPALDG 374

Query: 368 PLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPYQGS-LTINGIELRELDHAQWRQTIS 426
            LSF   +G T ALVG SGAGK++ +  +  F    G  + I+G ++R +        I+
Sbjct: 375 -LSFRAPAGATVALVGRSGAGKSTALQLVPRFYDADGGRVLIDGQDVRAVTFRSLWAAIA 433

Query: 427 WVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAGL 484
            V Q  +L   ++R N+  G+   +  ++    + A A +F+    +G D  I ++   L
Sbjct: 434 MVTQEIILFDDSVRANIAYGRPGASQAEIEDAARHAAAHDFILALPEGYDTVIGEQGTRL 493

Query: 485 SVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQP 544
           S GQ QRL +ARA+L+N    LLDE T++LD  SE++V +      Q RT + V H+L  
Sbjct: 494 SGGQRQRLVIARAMLKNAPILLLDEATSALDTESERHVRQAFERLRQGRTCIVVAHRLST 553

Query: 545 LQSVEQILVMENGLLVQAGHFEDLSQQSGLFATMLAAN 582
           + + + I V++ G +V++G    L  + GL+A + A +
Sbjct: 554 VMNADIIHVIDAGRIVESGSHAALLAEGGLYADLCATD 591