Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  181 bits (458), Expect = 9e-50
 Identities = 144/518 (27%), Positives = 254/518 (49%), Gaps = 26/518 (5%)

Query: 69  LAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLE 128
           LAAL+A + LCS+  ++A F    ++    R+ ++D +  L    ++ +  G  AA++ +
Sbjct: 60  LAALLAGQMLCSYLGQMACFLGAYDLMIGYREQVIDHIGRLPLGVLQKRRIGHLAAIVTD 119

Query: 129 QVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAA 188
            V+ + + F      +  +   P + LAV+  V+W   L  ++T P     MA++G+ AA
Sbjct: 120 DVKRVEEIFTHVAIDLVAAASAPLLFLAVLTWVDWRLSLALMVTLP-----MAIIGLNAA 174

Query: 189 DA-----SRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVL 243
                   R     +Q  SG   + +  L T+RLF++T    + +       R  ++ V 
Sbjct: 175 RGFFLARGRTKQTLVQETSGLIVEFVTGLKTLRLFNQTAPWLDRLDRRFAALREISLGVE 234

Query: 244 RIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEFYQP 303
             A+   ++  +   +   L ++     ++        GA   L   LF L+ A +  +P
Sbjct: 235 --AWGGGSIQLYRLCLEGGLVSLLLTAGWLANR-----GALDPLAWVLFALV-AGKLLEP 286

Query: 304 LRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSPQGK 363
           L D   +    +L V  AE  +  L+ E   L  G   L+   ++   A   V       
Sbjct: 287 LLDAAAFLTELRLMV-LAEGRIAALRAE-PLLPEGTATLAAAGEV---AFQNVSFRYDDA 341

Query: 364 RLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFM-PYQGSLTINGIELRELDHAQWR 422
            +   +SF + +G  TA+VGPSG+GKT+L++ +  F  P  G++TI G ++R LD     
Sbjct: 342 WVLRDVSFRVGAGTMTAIVGPSGSGKTTLLHLLARFFDPQAGAVTIAGRDIRTLDTQDLY 401

Query: 423 QTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQ--QGLDYPISDR 480
           + + +V Q+  L  GT+ +N+ +G+    +  V     AAY   F+ +   GL   I + 
Sbjct: 402 RHLGFVFQDVQLFDGTLLENLLIGRPGADEAAVAAACTAAYCDPFLARLPDGLASRIGEN 461

Query: 481 SAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTH 540
              LS G+ QRL++ARAIL++    LLDE TAS+D  ++  + R L+   Q RT + V H
Sbjct: 462 GQRLSGGERQRLSIARAILKDAPILLLDEATASVDPAAQYEIQRALSHLAQGRTVIMVAH 521

Query: 541 QLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATM 578
           +L  ++  +QILV++ G +++ G  +DL  Q+GL+A +
Sbjct: 522 RLHTIRHADQILVLDQGRILEQGRHDDLLAQAGLYAAL 559