Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  169 bits (427), Expect = 4e-46
 Identities = 141/530 (26%), Positives = 239/530 (45%), Gaps = 40/530 (7%)

Query: 68  GLAALIAVRALCSWGREIAGFRC----GEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWA 123
           GL  L+A      +   + G R     G  +    R  ++D L  L   +   +  G+  
Sbjct: 59  GLTGLVAAGLAGQFAFGVLGARTAFISGYGMMGDFRFTMMDHLSKLPLGFFTFQRTGALT 118

Query: 124 ALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALV 183
             + E V+ + + F + + ++     +P  I  ++  ++W  GL  + + PL    + L 
Sbjct: 119 TTVAENVKMVEEMFTKVVNEIVAGFTLPLFIGILLVVIDWRMGLAAVASVPLAFAVLRLT 178

Query: 184 GIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVL 243
             +    S K       +SG   + +  L  IR +    A+   +R + +  R       
Sbjct: 179 QGRFMRLSAKRVDVHAEVSGRLLEYIDGLRVIRGYGLAGAKFASLRDSLDTQRR------ 232

Query: 244 RIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYY---GASVTLFAGLFVLILAPEF 300
                 S  LE    + I   AV     +I  L  G +   G +++  + L  ++LA +F
Sbjct: 233 -----VSVALEIQGGLGIMAMAVVLEMGFIALLMVGAFAMLGGALSPASYLMAMVLAQKF 287

Query: 301 YQPL-RDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLS 359
           Y P+ R L      K L++             V TL +  R L +  + ++ +N+ +V  
Sbjct: 288 YAPITRSLMLLVDIKYLSLALKR---------VQTLLNAPR-LPEPVEPKVPSNNAIVFD 337

Query: 360 PQGKRL--------AGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPY-QGSLTING 410
               R            ++FTL+ G TTALVGPSGAGK+++ + I  F     G++ I G
Sbjct: 338 AVSFRYDEAGDEPALSEVTFTLREGTTTALVGPSGAGKSTVAHLIARFHDVTSGAVRIGG 397

Query: 411 IELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQ 470
           ++LR++   +  + +S V Q+  L   T+ +N+ +G+ + +DE V    + A    F+E 
Sbjct: 398 VDLRDMASDELMRRVSMVLQDVHLFDDTVANNIRIGRSDASDEDVVAAARHAQCHAFIEA 457

Query: 471 --QGLDYPISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTE 528
             QG   PI +  A LS GQ QRL++ARA+L++    LLDE TASLD   E    +    
Sbjct: 458 LPQGYQAPIGEGGAWLSGGQKQRLSIARALLKDAPIVLLDESTASLDPECEAAFHQAFKI 517

Query: 529 SIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATM 578
               +T L + H+L  + + +QI+VME G +VQ G   DL    GL+ T+
Sbjct: 518 LAAGKTVLVIAHRLHTVVNADQIVVMERGRVVQTGTHGDLIASPGLYRTL 567