Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., putative lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  173 bits (439), Expect = 2e-47
 Identities = 134/515 (26%), Positives = 251/515 (48%), Gaps = 22/515 (4%)

Query: 72  LIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVE 131
           + ++R L S  +++   +  +    ++R+ +L +L    P++ +  P G     +   V 
Sbjct: 125 IFSMRGLSSVCQKVILSKISQTSAAHMRKDMLARLIRQDPSFHQVNPPGFLIQRVQSDVM 184

Query: 132 NMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGI----KA 187
            ++  +   +      V     +LAV   V+W    I L+  P++ L +A V      KA
Sbjct: 185 AINSVWQALITGAGRDVTQMVAVLAVAISVDWRWTAIMLIGLPMLLLPLAAVQRYVRRKA 244

Query: 188 ADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAF 247
           + A         RL   F+     +  I+L +    +T+   G  + F    +       
Sbjct: 245 SQARDLGASLSTRLDEIFH----GIVPIKLNNLEDYQTDRFGGHMDQFVRSEVRASFGVA 300

Query: 248 LSSAVLEFFTSISIALTAVYFGFSYI-GELNFGYYGASVTLFAGLFVLILAPEFYQPLRD 306
            ++ +++    + +    +Y G   I G+   G + +  T     F          P+R 
Sbjct: 301 STTGMIDIMAGLGVMGVVLYGGAEIIEGKKTVGEFMSFFTAIGLAF---------DPMRR 351

Query: 307 LGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSPQGKRLA 366
           L +     Q A  A E I + + + +  L S E  ++    +  +A   V L      + 
Sbjct: 352 LASISGTWQAAAAAMERIKELMDSPIK-LVSPENPVAPPKGLPEVALSDVTLRYGDSDVL 410

Query: 367 GPLSFTLQSGKTTALVGPSGAGKTSLINTILGFM-PYQGSLTINGIELRELDHAQWRQTI 425
             LS   ++GKTTALVG SGAGK+++ N +   + P +GS+T+ G+ +R+LD    R   
Sbjct: 411 RELSLVAEAGKTTALVGASGAGKSTIFNLLTRLVDPQEGSVTVGGVAVRDLDLDDLRGLF 470

Query: 426 SWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAG 483
           S V Q  LL   T+R+N+ LG+ ++++E++ + L+A++  +F+ +   GLD  +  R + 
Sbjct: 471 SVVTQEALLFDETLRENILLGRTDVSEERLQEVLEASHVADFLPKLANGLDTLVGPRGSA 530

Query: 484 LSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQ 543
           LS GQ QR+ +ARA+L++    LLDE T++LDA+SE+ V + L +    RT L + H+L 
Sbjct: 531 LSGGQRQRVVIARALLRDTPILLLDEATSALDAQSEKVVQQALEKLSGGRTTLVIAHRLS 590

Query: 544 PLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATM 578
            +++ ++I+VME G ++  G  E+L ++ G++A +
Sbjct: 591 TIRNADKIVVMERGQVMDHGTHEELLERGGIYADL 625