Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  176 bits (447), Expect = 2e-48
 Identities = 149/555 (26%), Positives = 266/555 (47%), Gaps = 21/555 (3%)

Query: 35  SLFLVAQAALLASILHQLIIE--QVDKHLLIPHFFGLAALIAVRALCSWGREIAGF-RCG 91
           +L L A  +L   +  + +++  ++ +  L+  +F  A +IA       G   A   R G
Sbjct: 43  ALVLTAGLSLTLPLAVRRVVDNFRISEAALLNQYFAAALVIAALLAVGTGLRYALVTRLG 102

Query: 92  EEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSVLVP 151
           E +   IR+ + D++  + PA+ +    G   + +      +       +     ++L+ 
Sbjct: 103 ERVVADIRKAVFDRVIGMSPAFFEQIMTGEVLSRITTDTTLIQSVLGSSVSIALRNMLIF 162

Query: 152 FVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQA 211
              L ++   +     + LL  P V + + ++G +    SR+N   +   SG+  + L A
Sbjct: 163 IGGLVLMLLTSAKLTSLVLLIVPAVIVPILVLGRRLRKISRENQDWIAASSGNAGEALGA 222

Query: 212 LTTIRLFDRTTAE-TEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGF 270
           + T++ +    A  +E  R     F      +   AFL+  V+  F   S  +  ++ G 
Sbjct: 223 VQTVQAYTHEVASRSEFSRLTETAFDVSMRRIQTRAFLT--VIVIFLVFSGVVGVLWMGA 280

Query: 271 SYIGELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQT 330
           +   ++  G       +   ++ +++A      +  L   +   Q A GA E +V+ L T
Sbjct: 281 N---DVRAGIMSEGTLVQFVIYAVLVAGS----VAALSEIWSELQRAAGATERLVELL-T 332

Query: 331 EVDTLHS--GERHLSDNDDIEIIANDLVVLSPQGKRLAG--PLSFTLQSGKTTALVGPSG 386
            VD +      R L+     EI  +D+    P   ++     +S T+Q G+T A VGPSG
Sbjct: 333 AVDQVQDPYAPRALAAPVRGEIRFDDVSFRYPARPQIPALVDVSLTVQPGETVAFVGPSG 392

Query: 387 AGKTSLINTILGFM-PYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRDNVTL 445
           AGKT++I  I  F  P  G++ ++G  LR+L    +RQ I+ V Q+P++   + RDN+  
Sbjct: 393 AGKTTIIQMIQRFYDPTSGAVCLDGRPLRDLQRDDFRQHIALVPQDPVIFALSARDNIRF 452

Query: 446 GKHNIADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAGLSVGQAQRLALARAILQNGR 503
           G+   +D +V    +AA A +F+    +G D  + +R   LS GQ QR+A+ARAIL++  
Sbjct: 453 GRPGASDAEVEAAARAAAAHDFISALPEGYDSQVGERGVMLSGGQKQRIAIARAILRDAP 512

Query: 504 FWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLLVQAG 563
             LLDE T++LDA SE+ V   + E  Q RT L V H+L  ++  ++I+VME G ++  G
Sbjct: 513 VLLLDEATSALDAESERLVQAAVDELSQGRTTLIVAHRLATVKKADRIVVMEEGRIIATG 572

Query: 564 HFEDLSQQSGLFATM 578
             + L  + GL+A +
Sbjct: 573 THDQLVAEDGLYARL 587