Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) from Shewanella loihica PV-4

 Score =  584 bits (1506), Expect = e-171
 Identities = 305/581 (52%), Positives = 409/581 (70%), Gaps = 4/581 (0%)

Query: 1   MDKKKQRSLNLWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKH 60
           MDK  ++ L  WLKQQ      +L + V +GVL+   LVAQA LLA++LH LIIE + + 
Sbjct: 1   MDKTLEKVLGRWLKQQKSACGAYLNLTVLIGVLTGFALVAQAYLLATMLHGLIIENLPRE 60

Query: 61  LLIPHFFGLAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAG 120
                F  L A+I +RA  ++GRE   F+ G  +R  IRQ +LDKL +LGP +IKG+PAG
Sbjct: 61  AFTSEFIALIAVIVLRAALAYGRERISFKAGMLLRSQIRQSVLDKLVELGPVFIKGRPAG 120

Query: 121 SWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFM 180
           SWA+++LEQVE++HDF+A+YLPQM L+  +P  ILAVVFP+NWAAG+I L TAPL+PLFM
Sbjct: 121 SWASIVLEQVEDLHDFYAKYLPQMMLAGFIPLTILAVVFPINWAAGIILLATAPLIPLFM 180

Query: 181 ALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTM 240
            LVG+ AADA+RKNF AL RLSGHF DRL+ + T+RLF     E + +  ASE FR RTM
Sbjct: 181 ILVGMGAADANRKNFGALSRLSGHFMDRLRGIGTLRLFHAGEREQQAIESASEEFRSRTM 240

Query: 241 DVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEF 300
            VLR+AFLSSAVLEFF ++SIA+ AVYFGFS++  L+FG+YGA +TLF GLFVLILAPEF
Sbjct: 241 AVLRMAFLSSAVLEFFAAVSIAVLAVYFGFSFLDHLDFGHYGAGMTLFIGLFVLILAPEF 300

Query: 301 YQPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGER-HLSDNDDIEIIANDLVVLS 359
           YQPLRD+GT+YHAK  A+GAAE++++ L  + D      R   +    + I      VLS
Sbjct: 301 YQPLRDMGTHYHAKAQAIGAAEALMELLNHQGDEADEAPRVPFTSETPLSIKLQGAEVLS 360

Query: 360 PQGKRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPYQGSLTINGIELRELDHA 419
           P G+ L GP++  +  G+  A+VGPSGAGKTSL+N +LGF+ Y+GS+ ING+EL  L+  
Sbjct: 361 PDGQVLLGPITAEVIGGEQLAIVGPSGAGKTSLLNMLLGFLSYRGSVLINGVELSSLERE 420

Query: 420 QWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQQ--GLDYPI 477
            +R  ++W+GQ P L +GTI DNV +GK  ++DE +   L  A   +FV  Q  GL +PI
Sbjct: 421 SYRHHLAWLGQEPQLFHGTIGDNVAMGK-EMSDEAIYTLLDDARIGDFVRAQPLGLAHPI 479

Query: 478 SDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALF 537
            ++SAG+SVGQAQRL LARA+ Q+ + ++LDEPTASLD+ SE  VM+ L +  Q  T+L 
Sbjct: 480 GEQSAGVSVGQAQRLCLARALGQSAKLFVLDEPTASLDSHSEAAVMQALIDVRQGATSLL 539

Query: 538 VTHQLQPLQSVEQILVMENGLLVQAGHFEDLSQQSGLFATM 578
           VTH+L  L  +++I V++ G LVQ G +  L  + GLF+ +
Sbjct: 540 VTHRLDALIDMDKIWVLDGGKLVQQGDYHTLMAEPGLFSDL 580