Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., ABC transporter, ATP-binding protein/permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  191 bits (486), Expect = 6e-53
 Identities = 148/579 (25%), Positives = 270/579 (46%), Gaps = 23/579 (3%)

Query: 24  LAIAVGLGVLSSLFLVAQAALLASILHQLIIEQVDKHLL-IPHFFGLAALIAVRALCSWG 82
           +A+++G   + S      A L+   L  + I + ++ LL +P FF     I + AL  +G
Sbjct: 29  IALSMGCMAIVSATTAGTAYLIKPALDDIFINKDEQALLLVPAFF-----IVLTALKGFG 83

Query: 83  REIAGF---RCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFAR 139
           R    +     G  +   +R  +  K+  L   + +    G   + ++  V  + D    
Sbjct: 84  RYFQNYFMNYAGLRVIESLRDQLFTKIIHLPMRFYEDSQIGLLMSRIINDVSMIRDSLPS 143

Query: 140 YLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQ 199
            +  +   +L    ++ VVF  N       +L  PL        G K     R+N + L 
Sbjct: 144 TV-MIVRQILTMVGLIGVVFYQNAELATWAVLVLPLALYPFIYFGRKLRKLGRRNQEKLA 202

Query: 200 RLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSI 259
            +S    +    +  ++ F     E       ++     T+  + ++ LSS V+E   ++
Sbjct: 203 DISVILQEVFSGIRVVKAFATEKEEAHRFDAENQRLVKLTLKQICVSELSSPVMELIGAL 262

Query: 260 SIALTAVYFGFSYI-GELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAV 318
            I L  +Y G   I G+   G      T F+ +  L++    Y P++ L       Q A+
Sbjct: 263 GIGLVILYGGHEVISGKTTPG------TFFSFMAALVM---LYDPIKSLSMANREVQRAL 313

Query: 319 GAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSPQGKRLAGPLSFTLQSGKT 378
             AE + + L  E   + +      + D  E+   D+      G      ++  +++G+ 
Sbjct: 314 VGAERVFEILDAEDLCIETSGDLKFNRDFKEVCIKDVSFAYADGSPALRDINLCVRAGER 373

Query: 379 TALVGPSGAGKTSLINTILGFM-PYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYG 437
            A+VGPSGAGKT+L+N I  F  P  G + I+G+ L++ D A  R++IS V Q+  L   
Sbjct: 374 VAIVGPSGAGKTTLVNLIPRFYEPSSGCIEIDGVPLQDFDLADLRRSISVVSQDAFLFNL 433

Query: 438 TIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSAGLSVGQAQRLALA 495
           ++ DN+T G  N+   ++     AA+A EFV+Q  QG D  + +R   LS GQ QRL +A
Sbjct: 434 SVSDNITYGTPNVGAGRIEAAAHAAFAHEFVQQLAQGYDTVLGERGVKLSGGQKQRLTIA 493

Query: 496 RAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVME 555
           RA+L++    +LDE T++LD+++E+ V + L   ++ RT++ + H+L  + + ++I+VME
Sbjct: 494 RALLKDAPLLILDEATSALDSQAERIVQKALDNLMENRTSIVIAHRLSTVLNADRIVVME 553

Query: 556 NGLLVQAGHFEDLSQQSGLFATMLAANQALQAANKGDLD 594
           +G +V  G   +L  +  L+  + +     + A+   +D
Sbjct: 554 DGRVVDQGPHAELLGRCELYTRLYSIQFGQEKADADRID 592