Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  152 bits (385), Expect = 3e-41
 Identities = 129/513 (25%), Positives = 228/513 (44%), Gaps = 15/513 (2%)

Query: 69  LAALIAVRALCSWGREIAGFRCGEEIRRYIRQLILDKLRDLGPAYIKGKPAGSWAALMLE 128
           LA +   +  C +            + R IR ++  K+  L   +   +  G   A M  
Sbjct: 99  LALMTLFKTSCYFASSAVMIPLRTGVVRDIRIMVYAKVMRLPMGFFSEERKGDIIARMSG 158

Query: 129 QVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNWAAGLIFLLTAPLVPLFMALVGIKAA 188
            V  + +     L  +  S ++  +    +   +W   L  +L  P +   M  VG K  
Sbjct: 159 DVGEVENSITSSLDMLIKSPIMIILYFITLIATSWKLTLFTVLVLPAMGWLMGKVGRKLK 218

Query: 189 DASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLRIAFL 248
             S +             + L  L  I+ F       +     S   R     V     L
Sbjct: 219 RQSLEAQGKWSDTMSQLEETLGGLRIIKAFIAEDRMIDRFTRCSNELRDAVNKVAMRQAL 278

Query: 249 SSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGASVTLFAGLFVLILAPEFYQPLRDLG 308
           +  + EF  +I I ++ ++FG    G L  G+  +S+T    +F +++      PL+D  
Sbjct: 279 AHPMSEFLGTILI-VSVLWFG----GALILGH-NSSLTAPTFIFYMVILYSVINPLKDFA 332

Query: 309 TYYHAKQLAVGAAESIVDFLQTE--VDTLHSGERHLSDNDDIEIIANDLVVLSPQGKR-L 365
              +     + + E +   L+ E  +  + + +     ND IE      +  S  GKR +
Sbjct: 333 KAGYNIPKGLASMERVDKILKAENNIKEIPNPKPLTGMNDRIEFKD---ISFSYDGKREV 389

Query: 366 AGPLSFTLQSGKTTALVGPSGAGKTSLINTILGFMPYQGS-LTINGIELRELDHAQWRQT 424
              ++ T+  GKT ALVG SG+GK++L++ +  +   QG  +TI+G  ++++  A  R  
Sbjct: 390 LKHVNLTVPKGKTVALVGQSGSGKSTLVDLLPRYHDVQGGDITIDGTSIKDVRIADLRSL 449

Query: 425 ISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEFVEQ--QGLDYPISDRSA 482
           I  V Q  +L   T  +N+  G  N   EQV +  + A A +F+ +  +G +  I DR  
Sbjct: 450 IGNVNQEAILFNDTFFNNIAFGVENATMEQVIEAAKIANAHDFIMEKPEGYNTNIGDRGG 509

Query: 483 GLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQL 542
            LS GQ QR+++ARAIL+N    +LDE T++LD  SE+ V   L   ++ RT + + H+L
Sbjct: 510 KLSGGQRQRVSIARAILKNPPILILDEATSALDTESERLVQEALERLMKTRTTIAIAHRL 569

Query: 543 QPLQSVEQILVMENGLLVQAGHFEDLSQQSGLF 575
             +++ ++I V+  G +V+ G  E+L +  G +
Sbjct: 570 STIKNADEICVLYEGEIVERGRHEELLELDGYY 602