Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) from Shewanella sp. ANA-3

 Score =  595 bits (1533), Expect = e-174
 Identities = 318/623 (51%), Positives = 422/623 (67%), Gaps = 41/623 (6%)

Query: 1   MDKKKQRSLNLWLKQQSKLAKRWLAIAVGLGVLSSLFLVAQAALLASILHQLIIEQ---- 56
           MDK  ++SL +WLK Q K    ++ ++V  G+LS++ L+AQA L+A++L  +I++     
Sbjct: 1   MDKSLEKSLLVWLKSQKKACGWFVKLSVWCGMLSAIALIAQAYLIATLLDGVIVDNALQA 60

Query: 57  -------------VDKHLLIPHFFGLAALIAVRALCSWGREIAGFRCGEEIRRYIRQLIL 103
                        V     +PHF  L  L+ +RAL ++GRE A F  G+ +R+ IR  ++
Sbjct: 61  FTEGGNSTPIQPAVGASDYLPHFMALIGLMLLRALLAYGRERASFEAGKRLRQQIRGAVM 120

Query: 104 DKLRDLGPAYIKGKPAGSWAALMLEQVENMHDFFARYLPQMSLSVLVPFVILAVVFPVNW 163
           DKL  LGPA+IKGKPAGSWA+++LEQVE++ DF+ARYLPQM+L+ ++P +IL  VFP+NW
Sbjct: 121 DKLTRLGPAFIKGKPAGSWASIVLEQVEDLQDFYARYLPQMTLAGVIPLLILIAVFPINW 180

Query: 164 AAGLIFLLTAPLVPLFMALVGIKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTA 223
           AAGLI LLTAPL+PLFM LVG+ AADA+RKNF AL RLSGHF DRL+ L T++LF R  A
Sbjct: 181 AAGLILLLTAPLIPLFMILVGMGAADANRKNFNALARLSGHFMDRLKGLATLKLFHRGDA 240

Query: 224 ETEHMRGASEVFRHRTMDVLRIAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGA 283
           E + +  ASE FR RTM VLR+AFLSSAVLEFF ++SIA+ AVYFGFSY+G L+FGYYGA
Sbjct: 241 ELKVIEKASEEFRSRTMSVLRMAFLSSAVLEFFAAVSIAVLAVYFGFSYLGHLDFGYYGA 300

Query: 284 SV------------TLFAGLFVLILAPEFYQPLRDLGTYYHAKQLAVGAAESIVDFLQTE 331
                         +LF GLF+LILAPEFYQPLRD+GT+YHAK  A+GAA++++  L+  
Sbjct: 301 HAQLGPNANEGLPFSLFVGLFILILAPEFYQPLRDMGTHYHAKAQAIGAAQALMTLLEHP 360

Query: 332 VDTLHSGERHLSDNDDI----------EIIANDLVVLSPQGKRLAGPLSFTLQSGKTTAL 381
                S  +  S  D +           +   DL V S  G RL GP+SF L+ G+  AL
Sbjct: 361 EPESSSEPKSGSAQDKLGLQTRLDKLTHLSVKDLEVYSTDGSRLLGPISFELKQGEHLAL 420

Query: 382 VGPSGAGKTSLINTILGFMPYQGSLTINGIELRELDHAQWRQTISWVGQNPLLLYGTIRD 441
           VGPSGAGKTSL+N +LGF+PY+G L I+G+EL  LD A WRQ ++W+GQ P L +GT+R+
Sbjct: 421 VGPSGAGKTSLLNALLGFLPYKGKLLIDGVELASLDLAHWRQQLAWLGQEPQLFHGTVRE 480

Query: 442 NVTLGKHNIADEQVTQTLQAAYAQEFVEQQ--GLDYPISDRSAGLSVGQAQRLALARAIL 499
           NV L    + DEQV Q L+ A   EFV  Q  GL  PI ++S+ LSVGQAQR+ALARA+ 
Sbjct: 481 NVALANPEMTDEQVWQLLEQANIHEFVRAQPLGLATPIGEQSSTLSVGQAQRIALARALG 540

Query: 500 QNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTALFVTHQLQPLQSVEQILVMENGLL 559
           Q  + ++LDEPTASLD+ SEQ V R L  ++  +  + VTH++  L  +  ILV++ G +
Sbjct: 541 QAAQVFILDEPTASLDSVSEQLVSRTLKAAMAGKMGIMVTHRVDQLDHMSSILVLDKGKI 600

Query: 560 VQAGHFEDLSQQSGLFATMLAAN 582
           VQ G F  LS + GLF TML  N
Sbjct: 601 VQRGDFATLSTEVGLFQTMLHEN 623