Pairwise Alignments

Query, 595 a.a., thiol reductant ABC exporter subunit CydD from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  147 bits (371), Expect = 1e-39
 Identities = 113/387 (29%), Positives = 190/387 (49%), Gaps = 22/387 (5%)

Query: 185 IKAADASRKNFKALQRLSGHFYDRLQALTTIRLFDRTTAETEHMRGASEVFRHRTMDVLR 244
           +KAA      F +L+   GH  + L AL +I+      AE    +   ++  H     LR
Sbjct: 333 LKAAIEEGNKFSSLKH--GHLIESLSALESIKA---NGAEGIVQKSWQQMIGHSANWQLR 387

Query: 245 IAFLSSAVLEFFTSISIALTAVYFGFSYIGELNFGYYGAS---VTLFAGLFVLILAPEFY 301
              LS++V  F   I          F+ +  +  G Y  S   +++   +  ++L+    
Sbjct: 388 SKKLSNSVSNFANFI--------VQFTVVCVVILGVYRVSDNAISMGGIIAAVMLSSRAI 439

Query: 302 QPLRDLGTYYHAKQLAVGAAESIVDFLQTEVDTLHSGERHLSDNDDIEIIANDLVVLSPQ 361
            P+  L            A   + + L T+ D   +    +S    I  I  D V  S  
Sbjct: 440 APMAQLAGLLTRANHTASALRQLNE-LMTQEDEFENKGHLVSKLRLIGKINADHVGFSYP 498

Query: 362 G--KRLAGPLSFTLQSGKTTALVGPSGAGKTSLINTILG-FMPYQGSLTINGIELRELDH 418
           G  K +  PL+ T+  G+  A++G +G+GK++L   ++G F P  GSL  +G++  ++  
Sbjct: 499 GSEKPVLHPLTLTINPGERVAIIGRNGSGKSTLAKLLVGLFQPTTGSLRYDGVDSAQIHP 558

Query: 419 AQWRQTISWVGQNPLLLYGTIRDNVTLGKHNIADEQVTQTLQAAYAQEF--VEQQGLDYP 476
           +  R+   ++ Q+  L +GTIRDN+  G   + + Q+ + +Q +   +F  +E +GLD  
Sbjct: 559 SDLRRNFGYLPQDVTLFHGTIRDNILFGTRQVTEHQLIRAVQLSGVSQFTHMEAEGLDQQ 618

Query: 477 ISDRSAGLSVGQAQRLALARAILQNGRFWLLDEPTASLDARSEQYVMRGLTESIQQRTAL 536
           + +    LS GQ Q +ALARA L +    L+DEPTASLDAR+EQ  +R +    + RT L
Sbjct: 619 VGEGGMSLSRGQRQTVALARATLNDPPVLLMDEPTASLDARAEQQFIRSMQNVSKDRTLL 678

Query: 537 FVTHQLQPLQSVEQILVMENGLLVQAG 563
            +TH++  LQ V++I+V+E G +V  G
Sbjct: 679 LITHKMHLLQLVDRIIVLERGHVVADG 705