Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., lipid A export permease/ATP-binding protein MsbA from Pseudomonas stutzeri RCH2

 Score =  184 bits (466), Expect = 1e-50
 Identities = 140/490 (28%), Positives = 241/490 (49%), Gaps = 24/490 (4%)

Query: 92  LLTDLRVFFFEKLTPLIPGRLSAVRDADMLNRIVADVDAMDHVYLRLINPVTVGVLGIAA 151
           L+ DLR+  F  +  L      +     +++RI  +V  +       I  V    + +  
Sbjct: 113 LVHDLRLALFNNMLTLPNRYFDSHNSGHLISRITYNVTMVTGAATDAIKVVVREGMTVIF 172

Query: 152 LTTLIAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNGQHLTQNKAELRVRTLDWLQGY 211
           L   + W + +L + + AIL ++  +  +   +  +K  + +     ++     + +QGY
Sbjct: 173 LFATLLWMNWKLTLVMLAILPVIGFMVSSASKKF-RKQSKKIQLAMGDVTHVASETIQGY 231

Query: 212 SELTIFGAEQTYRQAILTAQD----KLLRNQYVNAQVSGLAQSLLLLANGWTLVLMIWLA 267
             +  FG E   R   LTA      K LR    NA  +   Q ++  A    + L++ L 
Sbjct: 232 RVVRSFGGEPYERNRFLTASSENTAKQLRMVKTNAVYTPSLQLVIYSAMAVLMFLVLLLR 291

Query: 268 ADGVGGQTPDPLIALVAFATMASV--ELLMPIAGAFQHLGQTLTSARRLNEIILAKPEVE 325
            D   G        LVA+ T+A +  + +  ++     + + +  A  + E +  +PE++
Sbjct: 292 GDASAGD-------LVAYITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEEPEID 344

Query: 326 F-TAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQ 384
             T +  A +G  ++E   + F Y     + + D + T+  GQ VA+VG++GSGKSTL  
Sbjct: 345 QGTLEREAVSG--HLEVRNLDFVYPGTDKQVLRDISFTIEPGQMVALVGRSGSGKSTLAN 402

Query: 385 LLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGTLRDNLKL-----AKP 439
           L+ R++  + GQI + G D+  +   +LR  I++V+Q+V + N T+ +N+       A  
Sbjct: 403 LIPRFYHHEAGQILLDGADVESYTLRNLRRHIALVTQQVTLFNDTVANNIAYGDLAGAPL 462

Query: 440 DATDEALSDILQQVGLEKLLQDAALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLLD 499
           D    A  D      +E++ +     T +GE G  LSGG+++RL IARALL N+P+L+LD
Sbjct: 463 DDIRRAARDAYADEFIEQMPE--GYQTLVGENGVLLSGGQRQRLAIARALLKNSPVLILD 520

Query: 500 EPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHTL 559
           E T  LD ++E+ I   L      +T L I HRL  +E+ D I ++EQG++VE G H  L
Sbjct: 521 EATSALDTESERHIQGALDHVMQGRTTLVIAHRLSTIEKADQILVMEQGRIVERGTHAEL 580

Query: 560 LAQHGRYHKL 569
           LA +G Y +L
Sbjct: 581 LAVNGAYARL 590