Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., ABC transporter, ATP-binding protein MsbA (RefSeq) from Shewanella amazonensis SB2B

 Score =  187 bits (475), Expect = 1e-51
 Identities = 132/491 (26%), Positives = 247/491 (50%), Gaps = 17/491 (3%)

Query: 91  KLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNRIVADVDAMDHVY-LRLINPVTVGV--L 147
           KL+ D+R   FE    L    +      ++++R+  D + +       LI+ V  GV  +
Sbjct: 111 KLIMDMRQQVFEHYLTLPVSYIDKENSGNLISRVTFDTEQIARASGSALISIVRDGVTVI 170

Query: 148 GIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNGQHLTQNKAELRVRTLDW 207
           G+  L    +W      + +G I+ LV+      F ++ ++    +      +   T   
Sbjct: 171 GMLGLMFYNSWKLSLCILIVGPIIGLVIATVSRRFRKISRQ----IQSAMGGVTAVTEQM 226

Query: 208 LQGYSELTIFGAEQTYRQAILTAQDKLLRNQYVNAQVSGLAQSLLLLANGWTLVLMIWLA 267
           ++G+  +  FG ++T  +      D         A    ++Q  +++   + L  +++ A
Sbjct: 227 IKGHKNVLAFGGQETEAKRFAQVNDHNRHQNMKLAVAQAISQPTIMIIGSFALAFVLYAA 286

Query: 268 A-DGVGGQTPDPLIALVAFATMASVELLMPIAGAFQHLGQTLTSARRLNEIILAKPEVEF 326
           + D +  +      A V  A MA+++ +  +        + + +   + E++    E + 
Sbjct: 287 SFDALKSELTAGTFATVLAAMMATLQPIKNLTRVNAEFQRGIAACTTVFELLDTPAEHDK 346

Query: 327 TAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLL 386
               T    + ++ F  V F Y+  + +A+D  +  +  G+ +A+VG++GSGKST+  L+
Sbjct: 347 GTFET-ERVKGHVRFEQVAFRYEGQEGRALDGISFDVPPGKTLALVGRSGSGKSTIASLI 405

Query: 387 CRYWD-VQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGTLRDNLKLAKPDATDEA 445
            R++  ++QG I + G ++ ++R  +LR+ +++VSQ+V + N T+ +N+  A P A    
Sbjct: 406 NRFYGGLEQGAIELDGVNVEDYRLKNLRSQVALVSQQVTLFNDTIANNIAYACPWAVTR- 464

Query: 446 LSDILQQVGLEKLLQ-----DAALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLLDE 500
              I Q   L   ++      + L+T +GE G  LSGG+++R+ IARA+L NAP+L+LDE
Sbjct: 465 -EQIEQAATLAHAMEFISKLPSGLDTQVGENGVLLSGGQRQRIAIARAMLRNAPVLILDE 523

Query: 501 PTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHTLL 560
            T  LD ++E+ I + L     ++T + I HRL  +E  D I +IEQG++VE G+H +LL
Sbjct: 524 ATSALDTESEKAIQEGLENLRQNRTSIVIAHRLSTIESADEILVIEQGRIVERGNHKSLL 583

Query: 561 AQHGRYHKLTQ 571
           AQ G Y KL Q
Sbjct: 584 AQDGMYAKLYQ 594