Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  185 bits (469), Expect = 5e-51
 Identities = 165/577 (28%), Positives = 270/577 (46%), Gaps = 47/577 (8%)

Query: 30  LASIGLLTLSGWFLSAAAVAGLSIARETFNYMLPGAFVR---GFAMG-------RTAGRW 79
           L +I L  +    L+AA VA   + +   + ++ G+  +   G  +G       +    +
Sbjct: 5   LGTIALAVMWMLVLAAATVAVAHMLKPAIDGIVVGSDPQALWGIGLGILLAFAVKAVSNF 64

Query: 80  GERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNRIVADVDAMDHVYLRLI 139
              V+   A    ++D R   +  L+ +  G   A   + +  R   D+  +       +
Sbjct: 65  FSVVLVAKAGLAAVSDARNRLYRHLSEMDLGFFLAHSASALAARFTVDLHLLRLAVSNGL 124

Query: 140 NPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNGQ---HLTQN 196
             +   ++ +  L     W D Q  M L A + L L +WP    RLG++  +      ++
Sbjct: 125 TSLGRDLMTLIGLVAYTFWVDWQ--MALLAYIALPLAIWPVA--RLGRRIRRIAGRTQRD 180

Query: 197 KAELRVRTLDWLQGYSELTIFGAEQTYR----QAILTAQDKLLRNQYVNAQVSGLAQSLL 252
              L  +    L+G   + I+GAE+  R    + I   Q +  + ++  A V+ + + ++
Sbjct: 181 LGSLNAQLTQTLRGIRMVKIYGAEEMERARVHRLIAAVQTQSFKAEWTRALVTPIMEGVV 240

Query: 253 LLANGWTLVLMIWLAADGVGGQ-TPDPLIALVAFATMASVELLMPIAGAFQHLGQTLTSA 311
            LA G  L    +  A  + G+ TP  L A +  A M + +    +A     L + L +A
Sbjct: 241 GLAAGAALY---YGGARVLAGEVTPGDLTAFLG-AVMLAYQPAKRLANLHTILQEGLAAA 296

Query: 312 RRLNEIILAKPEV-EFTAQPTAHNGQYNIEFNGVHFAYQ--------------ANKPKAI 356
            R+  ++  KP V E    P    G   + F+ V FAY               A  P A+
Sbjct: 297 DRMYHLLDLKPAVAEAPGAPPLRPGPGTVRFDDVTFAYDGGPGPELGDDASGPAAAPPAL 356

Query: 357 DDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAI 416
               LTL  G  VA+VG +G+GKSTL+ L+ R  D Q+G++ I G D+R    + L A I
Sbjct: 357 RGVDLTLEAGTVVALVGPSGAGKSTLMNLIPRLHDPQRGRVLIDGQDVRAVSFASLWARI 416

Query: 417 SVVSQRVDILNGTLRDNLKLAKPDATDEALSDILQQVGLEKLLQDAAL----NTWLGEGG 472
            +VSQ V + + T+R N+   +P+A+ E +    ++      +  AAL    +T LGE G
Sbjct: 417 GLVSQDVVVFDDTVRANIAYGRPEASAEEVERAARRAAAHDFI--AALPDGYDTRLGEQG 474

Query: 473 RQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHR 532
            +LSGG+++RL IARA L +APILLLDEPT  LD ++E+ +   L      +T L I HR
Sbjct: 475 VRLSGGQRQRLCIARAFLKDAPILLLDEPTAALDTESERLVQSALAALMAGRTCLIIAHR 534

Query: 533 LVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
           L  +   D I ++ +G +VE G H  LLA+ G Y +L
Sbjct: 535 LSTIAGADVIHVMAEGAVVESGDHAGLLAKDGLYARL 571