Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  194 bits (494), Expect = 6e-54
 Identities = 161/562 (28%), Positives = 263/562 (46%), Gaps = 26/562 (4%)

Query: 18  LTLGMLLALLTVLASIGLLTLSGWFLSAAAVAGLSIARETFNYMLPGAFVRGFAMGRTAG 77
           L+L ML +     A +GL  L   +  A  + G +  R+  + ++   F    AMG   G
Sbjct: 15  LSLAMLAS--AGAAVLGLAPLLAIYTLALEIMGDAPDRQAIHAVV---FWTALAMG---G 66

Query: 78  RWGERVVTHN----ATFKLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNRIVADVDAMDH 133
           RW    +++N    A + LL DLR+   ++LT L  G +      D+   +  DV+ ++ 
Sbjct: 67  RWLLLFLSNNWSHMAAYALLFDLRLRIADRLTQLPLGFILTWSSGDLKRVLQEDVERLEM 126

Query: 134 VYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNGQHL 193
           V    +  V   V  +     ++ W DP +     A L + + +   + +R      +  
Sbjct: 127 VLGHTLTDVVAAVTLLIGAGIVLVWMDPIMAAAAFAPLPVAIGL-QAMLWRGSHDTVEAY 185

Query: 194 TQNKAELRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKL--LRNQYVNAQVSGLAQSL 251
           TQ    +    +++++    +  FG  QT    +    D    +   + +A V      +
Sbjct: 186 TQAAGRMNAAIVEFIRAIPVIKTFGRGQTSMGHLKRTIDDYQGIVVAFSSAMVPAWVGFM 245

Query: 252 LLLANGWTLVLMI--WLAADGVGGQTPDPLIALVAFATMASVELLMPIAGAFQHLGQTLT 309
           + L +G   VL I  W     + G    P   L     +  ++ L+ I     H+  TL 
Sbjct: 246 VALGSGLLFVLPIGGWRL---LSGAIDGPTFILFLLLGVGLMQSLVQIITFGNHMRTTLA 302

Query: 310 SARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQKV 369
           S  R+  I+ A P +   A  T      ++ F+ V F+Y   + K +DD TLT   G + 
Sbjct: 303 SIERVRGILDA-PTLAGGAITTPP-ASLDVSFSHVSFSY--GEKKVLDDITLTCPPGART 358

Query: 370 AIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGT 429
           AIVG +G+GK+TL  L  R+WD QQG I+IGG  + ++    L    + V Q V + + T
Sbjct: 359 AIVGPSGAGKTTLAHLAARFWDPQQGAISIGGVPLSDYAPETLVRLTASVFQDVFLFHDT 418

Query: 430 LRDNLKLAKPDATDEALSDILQQVGLEKLLQDA--ALNTWLGEGGRQLSGGEKRRLGIAR 487
           +  NL++  PDAT E +    ++  +   +       +T LG+ G +LSGGEK+RL IAR
Sbjct: 419 ILANLRVGAPDATREQVIAAAREAQIHDFIMTLPDGYDTVLGDRGARLSGGEKQRLSIAR 478

Query: 488 ALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIALIEQ 547
           A+L +API++LDE T   D   E++I   L      KTV+ I HRL  ++  D IA+++ 
Sbjct: 479 AILKDAPIVILDEATAFADPVNERRIRTALERLCRDKTVITIAHRLSTIQDADQIAVLDD 538

Query: 548 GQLVEYGHHHTLLAQHGRYHKL 569
           G+LV+ G H  LL     Y +L
Sbjct: 539 GRLVDVGRHDILLTHCAVYQRL 560