Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  176 bits (447), Expect = 2e-48
 Identities = 144/521 (27%), Positives = 238/521 (45%), Gaps = 34/521 (6%)

Query: 62  LPGAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDADML 121
           L G F  G    RTA   G         + ++ D R    + L+ L  G  +  R   + 
Sbjct: 68  LAGQFAFGVLGARTAFISG---------YGMMGDFRFTMMDHLSKLPLGFFTFQRTGALT 118

Query: 122 NRIVADVDAMDHVYLRLINPVTVGV---LGIAALTTLIAWFDPQLGMTLGAILLLVLLVW 178
             +  +V  ++ ++ +++N +  G    L I  L  +I W      +    +   VL + 
Sbjct: 119 TTVAENVKMVEEMFTKVVNEIVAGFTLPLFIGILLVVIDWRMGLAAVASVPLAFAVLRLT 178

Query: 179 PTLFYRLGKKNGQHLTQNKAELRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRNQ 238
              F RL  K         AE+  R L+++ G   +  +G          + +D L   +
Sbjct: 179 QGRFMRLSAKR----VDVHAEVSGRLLEYIDGLRVIRGYGLAGA---KFASLRDSLDTQR 231

Query: 239 YVNAQVS-----GLAQSLLLLANGWTLVLMIWLAADGVGGQTPDPLIALVAFATMASVEL 293
            V+  +      G+    ++L  G+  +LM+   A   G  +P    A    A + + + 
Sbjct: 232 RVSVALEIQGGLGIMAMAVVLEMGFIALLMVGAFAMLGGALSP----ASYLMAMVLAQKF 287

Query: 294 LMPIAGAFQHLGQT--LTSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVHFAY-QA 350
             PI  +   L     L+ A +  + +L  P +    +P   +    I F+ V F Y +A
Sbjct: 288 YAPITRSLMLLVDIKYLSLALKRVQTLLNAPRLPEPVEPKVPSNNA-IVFDAVSFRYDEA 346

Query: 351 NKPKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRES 410
               A+ + T TL +G   A+VG +G+GKST+  L+ R+ DV  G + IGG D+R+    
Sbjct: 347 GDEPALSEVTFTLREGTTTALVGPSGAGKSTVAHLIARFHDVTSGAVRIGGVDLRDMASD 406

Query: 411 DLRAAISVVSQRVDILNGTLRDNLKLAKPDATDEALSDILQQVGLEKLLQ--DAALNTWL 468
           +L   +S+V Q V + + T+ +N+++ + DA+DE +    +       ++         +
Sbjct: 407 ELMRRVSMVLQDVHLFDDTVANNIRIGRSDASDEDVVAAARHAQCHAFIEALPQGYQAPI 466

Query: 469 GEGGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLF 528
           GEGG  LSGG+K+RL IARALL +API+LLDE T  LD + E    Q        KTVL 
Sbjct: 467 GEGGAWLSGGQKQRLSIARALLKDAPIVLLDESTASLDPECEAAFHQAFKILAAGKTVLV 526

Query: 529 ITHRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
           I HRL  +   D I ++E+G++V+ G H  L+A  G Y  L
Sbjct: 527 IAHRLHTVVNADQIVVMERGRVVQTGTHGDLIASPGLYRTL 567