Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., ABC transporter, ATP-binding protein CydC (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  509 bits (1310), Expect = e-148
 Identities = 266/583 (45%), Positives = 391/583 (67%), Gaps = 11/583 (1%)

Query: 1   MRDLLPYLKLYKKHWFGLTLGMLLALLTVLASIGLLTLSGWFLSAAAVAGLS-IARETFN 59
           M+ L+P+++L+   W  + +G++L L T++A IGLL+LSGWFLSA AVAGL+ ++ + FN
Sbjct: 1   MKVLIPFIRLFSHQWVMMAVGLILTLTTLMAGIGLLSLSGWFLSATAVAGLTLVSAQVFN 60

Query: 60  YMLPGAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDAD 119
           +  P   VR  ++ RTA R+GER+ TH ATFKLLT+LRV+ + KL PL    L  +R AD
Sbjct: 61  FFTPAGGVRFLSIARTASRYGERLATHEATFKLLTELRVWAWRKLFPLSAKNLQGLRRAD 120

Query: 120 MLNRIVADVDAMDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWP 179
           MLNR+VAD+D +DH+YLRL+ P+   +L    L   +AWFD +L ++L   L+LV L+ P
Sbjct: 121 MLNRLVADIDTLDHLYLRLLTPMAASLLMTGLLYLFLAWFDAKLALSLCLFLILVWLLLP 180

Query: 180 TLFYRLGKKNGQHLTQNKAELRVRTLDWLQGYSELTIFGAEQTYRQAILTAQDKLLRNQY 239
            LFYRLG    +++ + K + RV+ LD LQG +EL++FGA   YRQ +  A+  L  +Q 
Sbjct: 181 LLFYRLGHAPSRNMLETKRQYRVQLLDILQGQAELSLFGANARYRQKLDDAEQALFASQT 240

Query: 240 VNAQVSGLAQSLLLLANGWTLVLMIWLAADGVGGQT-PDPLIALVAFATMASVELLMPIA 298
             A ++ L+Q++L++A G  L++M++LAA+GVG    P P+ AL+ FATMA VE++MPIA
Sbjct: 241 AMANITALSQAMLIIATGSALIMMLFLAANGVGDAVPPGPMFALMVFATMACVEMMMPIA 300

Query: 299 GAFQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVHFAYQANKPKAIDD 358
           GAFQHL   + +A R+NEI   + ++ F+           ++ + +HF Y  N+   +  
Sbjct: 301 GAFQHLSGCVLAAMRINEITEQESDIRFSTDTDLKAISGGLQIHDIHFGYLENQ-HVLQG 359

Query: 359 FTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISV 418
            +L +  GQKVA++G TG GKS+L+ L+ R W  Q GQI + G  + ++ E  LR+A++V
Sbjct: 360 LSLEIKPGQKVALLGSTGCGKSSLLSLITRDWQAQSGQIYLDGHLLSDYSECALRSAMTV 419

Query: 419 VSQRVDILNGTLRDNLKLAKP-------DATDEALSDILQQVGLEKLLQ-DAALNTWLGE 470
           VSQR+ +  GTLR+NL +A P        A D    D+LQQVGL  LL+ D  L+ W+GE
Sbjct: 420 VSQRIYLYAGTLRENLAIALPVPEGQKRTANDARFIDVLQQVGLGDLLKGDKPLDMWIGE 479

Query: 471 GGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFIT 530
           GGRQLSGGE+RR+G+ARALL +AP+LLLDEPTEGLDK+TE++I+ LL      KT+L I+
Sbjct: 480 GGRQLSGGEQRRIGVARALLRDAPLLLLDEPTEGLDKRTEREILSLLFEFAKDKTLLMIS 539

Query: 531 HRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKLTQKL 573
           HRL  + +MD I L+ +G+++  G+H +LL +   Y  L ++L
Sbjct: 540 HRLTAMAKMDQIHLMAEGKIMASGNHQSLLKECAAYQALYRRL 582