Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  174 bits (440), Expect = 1e-47
 Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 39/446 (8%)

Query: 152 LTTLIAWFDPQLGMTLGAILLLVL--LVWPTLFYRLG-------KKNGQHLTQNKAELRV 202
           L  ++ +F   L M   A + LV+  L+W  L+  L        K         ++ +  
Sbjct: 163 LVYILVYFTSMLVMVASADVRLVIPMLIWLALYIGLQWYFVPRLKTVSTEQADARSTMTG 222

Query: 203 RTLDWLQGYSELTIFG---AEQTYRQAILTA-QDKLLRNQYVNAQVSGLAQSLLLLANGW 258
           R +D     + + +F     E  Y +A + +  D + R   +   V+G++ S+ ++    
Sbjct: 223 RIVDSYTNITTVKLFAHTDKEADYAKASMRSFLDTVYRQMRL---VTGISVSVQII---- 275

Query: 259 TLVLMIWLAADGVGGQTPDPL-IALVAFATMASVEL-------LMPIAGAFQHLGQTLTS 310
             +L   +AA  +   + + + +  +A A   ++ L       +  I+  F+++G     
Sbjct: 276 NYMLAFSIAAVSIALWSDNAISVGAIAIAVSLALRLNGMSQWIMWEISSLFENIGTVTDG 335

Query: 311 ARRLNEIILAKPEVEFTAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQKVA 370
              L++  L +   +     T    Q  I+FN V F Y       ID+  L +  G+KV 
Sbjct: 336 MNTLSKTTLIQDSPDAN---TLVVKQGQIDFNQVSFHY-GEDAGVIDELNLNIKAGEKVG 391

Query: 371 IVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGTL 430
           +VG++G+GKSTL+ LL R++DV++G I I G DI+  ++  LR+ I +V+Q   +L+ T+
Sbjct: 392 LVGRSGAGKSTLVNLLMRFYDVEKGHICIDGQDIKAVKQDSLRSQIGMVTQDTSLLHRTI 451

Query: 431 RDNLKLAKPDATDEALSDILQQVGLEKLLQDAA-------LNTWLGEGGRQLSGGEKRRL 483
           R+N+    P A++  L   ++Q      + +         L+  +GE G +LSGG+++R+
Sbjct: 452 RENILYGNPGASEIQLEHAIKQAQAHDFINELTDPNGNHGLDAQVGERGVKLSGGQRQRV 511

Query: 484 GIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIA 543
            IAR LL NAPILLLDE T  LD + E  I + L+     KTV+ I HRL  +  MD + 
Sbjct: 512 AIARVLLKNAPILLLDEATSALDSEVEAAIQESLYELMQGKTVIAIAHRLSTIAAMDRLI 571

Query: 544 LIEQGQLVEYGHHHTLLAQHGRYHKL 569
           +++QG++VE G H  L+A  G Y +L
Sbjct: 572 VLDQGRIVEQGTHQELIAAGGIYAQL 597