Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., ABC transporter, ATP-binding protein MsbA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  185 bits (470), Expect = 4e-51
 Identities = 126/489 (25%), Positives = 247/489 (50%), Gaps = 13/489 (2%)

Query: 91  KLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNRIVADVDAMDHVY-LRLINPV--TVGVL 147
           +L+ D+R   FE    L    +      ++++++  D + +       LI+ V  +V ++
Sbjct: 113 RLIMDMRQQVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDSVTII 172

Query: 148 GIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNGQHLTQNKAELRVRTLDW 207
           G+  L    +W      + +G I+ +V+    T+  R  +K  + +     ++   T   
Sbjct: 173 GMLGLMFYNSWKLSLCILVIGPIMGVVI----TIVSRRFRKVSKQIQTAMGDVSAATEQM 228

Query: 208 LQGYSELTIFGAEQTYRQAILTAQDKLLRNQYVNAQVSGLAQSLLLLANGWTLVLMIWLA 267
           ++G+  +  FG ++T         D+        A    ++Q L+++   + L  +++ A
Sbjct: 229 IKGHKNVLAFGGQETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAA 288

Query: 268 A-DGVGGQTPDPLIALVAFATMASVELLMPIAGAFQHLGQTLTSARRLNEIILAKPEVEF 326
           + D +         A +  A MA ++ +  +        + + +   + E++   PE + 
Sbjct: 289 SLDSMKADLTAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTVPESD- 347

Query: 327 TAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLL 386
           T   T    + N+ F+ V F+Y+  + +A++     ++QGQ +A+VG++GSGKST+  L+
Sbjct: 348 TGTYTVARAKGNLRFDNVSFSYEGQERRALEKIDFEVSQGQTLALVGRSGSGKSTIASLV 407

Query: 387 CRYWD-VQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGTLRDNLKLAKP-DATDE 444
            R++  ++ G I +    I ++    LR+ +++VSQ+V + N T+ +N+  A P + T E
Sbjct: 408 TRFYTGLESGDILLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYAYPGEVTRE 467

Query: 445 ALSDILQQVGLEKLLQDA--ALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLLDEPT 502
            + +        + ++     L+T +GE G  LSGG+++R+ IARA+L +AP+L+LDE T
Sbjct: 468 QIIEAATLAHAMEFIEQLPDGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEAT 527

Query: 503 EGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQ 562
             LD ++E+ I Q L     ++T + I HRL  +E  D I +++QG++VE G H +LL  
Sbjct: 528 SALDTESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLEL 587

Query: 563 HGRYHKLTQ 571
            G Y KL Q
Sbjct: 588 GGMYAKLYQ 596