Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  171 bits (432), Expect = 1e-46
 Identities = 121/381 (31%), Positives = 207/381 (54%), Gaps = 26/381 (6%)

Query: 203 RTLDWLQGYSELTIFGAE----QTYRQAILTAQDKLLRNQYVNAQVSGLAQSLLLLANGW 258
           R +D L  Y  +  F  E    + Y QA+   +    +N+     ++G    ++ +A   
Sbjct: 216 RAIDSLLNYETVKYFNNEKYESERYDQALDQWEVAKRKNRLSLFALNGGQALIIAIA--- 272

Query: 259 TLVLMIWLAADGV--GGQTPDPLIALVAFATMASVELLMPI---AGAFQHLGQTLTSARR 313
            +  M+ LAA  V     T    + + AF     ++L MP+      ++ +   L +  R
Sbjct: 273 -MTAMMALAAYKVTHNEMTLGDFVLINAFM----MQLFMPLNFLGFVYREIRGALANIER 327

Query: 314 LNEIILAKPEVEFTAQPTAHNGQYN---IEFNGVHFAYQANKPKAIDDFTLTLAQGQKVA 370
           +  ++   P +    +P A + +     + F  V F+Y  ++P  + + +  +A G+KVA
Sbjct: 328 MFSLLDKHPSI--VDKPDALDFEPKRGELSFENVSFSYD-DRP-ILRNVSFKVAAGKKVA 383

Query: 371 IVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGTL 430
           +VG +G+GKSTLI+LL R++DV+QG+I I G DIR+  +  LR AI++V Q   + N +L
Sbjct: 384 VVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAIAIVPQDTVLFNDSL 443

Query: 431 RDNLKLAKPDATDEALSDILQQVGLEKLLQDAAL--NTWLGEGGRQLSGGEKRRLGIARA 488
            +N++  +P+A+D+ +   ++   LE  +   +   +T +GE G +LSGGEK+R+ IARA
Sbjct: 444 VENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWDTKVGERGLKLSGGEKQRVAIARA 503

Query: 489 LLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIALIEQG 548
           +L  +P+L+ DE T  LD ++EQ I+  L       T L + HRL  +   D I ++ +G
Sbjct: 504 ILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLSTIVDADQIVVLSKG 563

Query: 549 QLVEYGHHHTLLAQHGRYHKL 569
           ++VE G+H +LLAQ G Y KL
Sbjct: 564 EIVEQGNHSSLLAQDGLYAKL 584