Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  187 bits (476), Expect = 8e-52
 Identities = 143/519 (27%), Positives = 245/519 (47%), Gaps = 22/519 (4%)

Query: 64  GAFVRGFAMGRTAGRWGERVVTHNATFKLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNR 123
           G F+    + +T+  +    V       ++ D+R+  + K+  L  G  S  R  D++ R
Sbjct: 96  GLFLALMTLFKTSCYFASSAVMIPLRTGVVRDIRIMVYAKVMRLPMGFFSEERKGDIIAR 155

Query: 124 IVADVDAMDHVYLRLINPVTVGVLGIAALTTLIAWFDPQLGMTLGAILLLVLLVWPTLFY 183
           +  DV  ++       N +T  +  +     +I  +   L  T   + L  +LV P + +
Sbjct: 156 MSGDVGEVE-------NSITSSLDMLIKSPIMIILYFITLIATSWKLTLFTVLVLPAMGW 208

Query: 184 RLGKKNGQHLTQNKAELRVRTLDWLQGYSE-------LTIFGAEQTYRQAILTAQDKLLR 236
            +GK  G+ L +   E + +  D +    E       +  F AE           ++L  
Sbjct: 209 LMGKV-GRKLKRQSLEAQGKWSDTMSQLEETLGGLRIIKAFIAEDRMIDRFTRCSNELRD 267

Query: 237 NQYVNAQVSGLAQSLLLLANGWTLVLMIWLAADGVGGQTPDPLIALVAFATMASVELLMP 296
                A    LA  +        +V ++W     + G           F  +    ++ P
Sbjct: 268 AVNKVAMRQALAHPMSEFLGTILIVSVLWFGGALILGHNSSLTAPTFIFYMVILYSVINP 327

Query: 297 I---AGAFQHLGQTLTSARRLNEIILAKPEVEFTAQPTAHNGQYN-IEFNGVHFAYQANK 352
           +   A A  ++ + L S  R+++I+ A+  ++    P    G  + IEF  + F+Y   K
Sbjct: 328 LKDFAKAGYNIPKGLASMERVDKILKAENNIKEIPNPKPLTGMNDRIEFKDISFSYDG-K 386

Query: 353 PKAIDDFTLTLAQGQKVAIVGQTGSGKSTLIQLLCRYWDVQQGQITIGGTDIREWRESDL 412
            + +    LT+ +G+ VA+VGQ+GSGKSTL+ LL RY DVQ G ITI GT I++ R +DL
Sbjct: 387 REVLKHVNLTVPKGKTVALVGQSGSGKSTLVDLLPRYHDVQGGDITIDGTSIKDVRIADL 446

Query: 413 RAAISVVSQRVDILNGTLRDNLKLAKPDATDEALSDILQQVGLEKLLQDA--ALNTWLGE 470
           R+ I  V+Q   + N T  +N+     +AT E + +  +       + +     NT +G+
Sbjct: 447 RSLIGNVNQEAILFNDTFFNNIAFGVENATMEQVIEAAKIANAHDFIMEKPEGYNTNIGD 506

Query: 471 GGRQLSGGEKRRLGIARALLHNAPILLLDEPTEGLDKQTEQQIMQLLHCHFGHKTVLFIT 530
            G +LSGG+++R+ IARA+L N PIL+LDE T  LD ++E+ + + L      +T + I 
Sbjct: 507 RGGKLSGGQRQRVSIARAILKNPPILILDEATSALDTESERLVQEALERLMKTRTTIAIA 566

Query: 531 HRLVNLEQMDAIALIEQGQLVEYGHHHTLLAQHGRYHKL 569
           HRL  ++  D I ++ +G++VE G H  LL   G Y +L
Sbjct: 567 HRLSTIKNADEICVLYEGEIVERGRHEELLELDGYYKRL 605