Pairwise Alignments

Query, 573 a.a., cysteine/glutathione ABC transporter ATP-binding protein/permease CydC from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., ABC transporter ATP-binding/transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  164 bits (414), Expect = 1e-44
 Identities = 132/491 (26%), Positives = 239/491 (48%), Gaps = 26/491 (5%)

Query: 90  FKLLTDLRVFFFEKLTPLIPGRLSAVRDADMLNRIVADVDAMDHVYLRLINPVTVGVLGI 149
           +++  + R+   E L  L  G LS     D+ + ++ D   M    +    P  +G L +
Sbjct: 89  YEMSAEGRINLAEHLRKLSLGFLSRRDPGDLSSMLITDF-TMAETGISHHLPQLMGALVM 147

Query: 150 AALTTL-IAWFDPQLGMTLGAILLLVLLVWPTLFYRLGKKNGQHLTQNKAELRVRTLDWL 208
                L + W D ++ + +   L L + V   L     +K      + K     R  ++L
Sbjct: 148 PVFAFLGLLWIDWRMAVAMFVALPLAVAVL-LLSNIAQRKLSVRQIEAKINAGNRLEEYL 206

Query: 209 QGYSELTIF----GAEQTYRQAILTAQDKLLRNQYVNAQVSGLAQSLLLLANGWTLVLMI 264
           QG   +  +    G  +  + A    +   +R + +      +  S+ L+  G T +++ 
Sbjct: 207 QGIRVMKAYNLLGGKFERLKMAFSDLRRACIRQEALLGPF--ILFSVTLIRAGLTFMILC 264

Query: 265 WLAADGVGGQTPDPLIALVAFATMASVELLMPIAGAFQHLGQ----TLTSARRLNEIILA 320
                 +GG+    L+  V F  + S  +  P+  A  +  +    ++   R L   ++ 
Sbjct: 265 GTYLL-IGGELS--LLTFVMFLVVGS-RVFDPLTSALTNFAEFRYFSIAGGRILT--LMN 318

Query: 321 KPEVEFTAQPTAHNGQYNIEFNGVHFAYQANKPKAIDDFTLTLAQGQKVAIVGQTGSGKS 380
           +PE++   +    +G  +I F+ V F YQ  + + + D ++TL +G   A+VG +GSGKS
Sbjct: 319 EPEMKGD-RDVPESG--DITFDHVSFGYQ--EKEILHDISVTLRKGTLTALVGPSGSGKS 373

Query: 381 TLIQLLCRYWDVQQGQITIGGTDIREWRESDLRAAISVVSQRVDILNGTLRDNLKLAKPD 440
           T+++L  R++D ++G +   G D++E     L    S+V Q V +   TL++N++  + D
Sbjct: 374 TMLKLCARFYDPRKGSVRFNGMDMKELEPESLMKHCSMVFQDVYLFQDTLKNNIRFGRTD 433

Query: 441 ATDEALSDILQQVGLEKLLQ--DAALNTWLGEGGRQLSGGEKRRLGIARALLHNAPILLL 498
           ATDE +    ++    + +       +T +GEGG  LSGGEK+R+ IARA+L  AP++LL
Sbjct: 434 ATDEEIVAAAKKACCHEFIMRLPKGYDTMVGEGGCTLSGGEKQRISIARAMLKEAPVVLL 493

Query: 499 DEPTEGLDKQTEQQIMQLLHCHFGHKTVLFITHRLVNLEQMDAIALIEQGQLVEYGHHHT 558
           DE T  LD + E ++ Q ++     +TV+ I HRL  +   D I ++E+G++ E G H  
Sbjct: 494 DEATASLDPENEVEVQQAINTLIAGRTVIVIAHRLKTIRNADRIIVLEEGRIAEQGTHDE 553

Query: 559 LLAQHGRYHKL 569
           LL++ G Y KL
Sbjct: 554 LLSRPGLYAKL 564