Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  296 bits (757), Expect = 8e-85
 Identities = 158/319 (49%), Positives = 207/319 (64%), Gaps = 2/319 (0%)

Query: 3   EKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQE 62
           EKLQKVLAR G GSRR++EA I  GR+ VNGK A+LG R++  +A+  IDG V+  +   
Sbjct: 17  EKLQKVLARIGVGSRRDVEAWITQGRIKVNGKDAILGLRVDMHDAIT-IDGKVIKREEAA 75

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDG 122
           E + RV+ Y KP+GE+CTR DPEGR TVFD++P+ +  RWI++GRLD NT+GLL+FTTDG
Sbjct: 76  ETVRRVIMYNKPDGEICTRDDPEGRPTVFDKMPRPKEGRWINIGRLDINTTGLLMFTTDG 135

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYA-GGEGINH 181
           ELANRLMHPS +++REY VRV G+V +E +  L  GV LEDG ARF D+  A GGEG NH
Sbjct: 136 ELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPARFTDIKQAPGGEGFNH 195

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLRE 241
            ++ V+ EGRNREVRRLWESQG  VSRLKRVR+G +FL+  LP G W E+   +V+ L  
Sbjct: 196 WYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMGRWREMSQYEVDILAA 255

Query: 242 LVELRPEKETVLNMAPDAATRKRERTRSQKIRRAVRRHEERISATPGRSGKAPARRKPGG 301
            V L+P     +         + +R  S+ + +  R    R +A    +G  P+R     
Sbjct: 256 EVGLKPVAMPQMTAKSKDKLERMQRKSSRPMGKTERVRTLRPAAEGAPTGPRPSREPQIE 315

Query: 302 ESSTRNKVANQQQSSRKPR 320
                 K A +Q   R PR
Sbjct: 316 GERPARKPAPRQDGERGPR 334