Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., pseudouridine synthase from Pseudomonas fluorescens FW300-N2E3

 Score =  295 bits (756), Expect = 1e-84
 Identities = 160/320 (50%), Positives = 207/320 (64%), Gaps = 3/320 (0%)

Query: 3   EKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQE 62
           EKLQKVLAR G GSRR++EA I  GR+ VNGK A LG R++  +A+  IDG V+  +   
Sbjct: 17  EKLQKVLARIGVGSRRDVEAWISHGRIKVNGKDATLGLRVDLHDAIT-IDGKVIKREEAA 75

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDG 122
           E + RV+ Y KP+GE+CTR DPEGR TVFD++PK +  RWI++GRLD NT+GLL+FTTDG
Sbjct: 76  ESVRRVIMYNKPDGEICTRDDPEGRPTVFDKMPKPKEGRWINIGRLDINTTGLLMFTTDG 135

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYA-GGEGINH 181
           ELANRLMHPS +++REY VRV G+V +E +  L  GV LEDG A+F D+  A GGEG NH
Sbjct: 136 ELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPAKFTDIKQAPGGEGFNH 195

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLRE 241
            ++ V+ EGRNREVRRLWESQG  VSRLKRVR+G +FL+  LP G W E+   +V+ L  
Sbjct: 196 WYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMGRWREMSQYEVDVLSA 255

Query: 242 LVELRPEKETVLNMAPDAATRKRERTRSQKIRRAVR-RHEERISATPGRSGKAPARRKPG 300
            V L P     +N        + +R  S+ + ++ R R     +  P  +G  PAR    
Sbjct: 256 EVGLTPVAMPQMNAKSKDKLERMQRKSSRPVGKSERVRTLRPATGAPAAAGPRPAREPQI 315

Query: 301 GESSTRNKVANQQQSSRKPR 320
                  K A +Q   R PR
Sbjct: 316 EGERPARKPAPRQDGERGPR 335